BLASTX nr result

ID: Coptis21_contig00013833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013833
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527490.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002521818.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_002527491.1| conserved hypothetical protein [Ricinus comm...    62   4e-08

>ref|XP_002527490.1| conserved hypothetical protein [Ricinus communis]
           gi|223533130|gb|EEF34888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = -1

Query: 217 ARSKLRVGPRGLGEGLDHVVPRVEGTASVWFHRAAKTSRSRRWKDNESVAP 65
           ARSKLRV P GLGEG   + PR EGTA  WFHRAA TS S +WKDN  V P
Sbjct: 5   ARSKLRVDPCGLGEGPGSMGPRAEGTALGWFHRAAITSLSWQWKDNGPVLP 55


>ref|XP_002521818.1| conserved hypothetical protein [Ricinus communis]
           gi|223539031|gb|EEF40628.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/47 (68%), Positives = 34/47 (72%)
 Frame = -2

Query: 219 LPVPS*ELVLVD*AKAWTTWFLEWRVLRQSGFTEQRKPPALDGGRIT 79
           LP PS EL  V  AK  TT  LEWRVLR++GFTEQR PPALD G IT
Sbjct: 11  LPAPSGELSFVVLAKVGTTLLLEWRVLREAGFTEQRSPPALDSGWIT 57


>ref|XP_002527491.1| conserved hypothetical protein [Ricinus communis]
           gi|223533131|gb|EEF34889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/89 (47%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = +2

Query: 62  LWSNRLVILPPSRAGGFRCSVKPD*RSTLHSRNHVVQAFA*STRTNS*LGTGKSVCSNHK 241
           L  ++LVILP  RAGG RCSVKP  R  L SRN V  AFA           G++    H+
Sbjct: 14  LGRHQLVILPLPRAGGCRCSVKPASRCALRSRNQVTPAFAQGHIAQLSAWNGRARAQPHQ 73

Query: 242 -----PDQEP*GPCSITLMPSLELQAHAT 313
                P+Q P     ITLMP L LQAHAT
Sbjct: 74  GRPTGPEQRP-----ITLMPLLRLQAHAT 97