BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013802
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid...    59   5e-07
ref|NP_568216.1| Ribosomal protein L17 family protein [Arabidops...    58   7e-07
dbj|BAB09535.1| 50S ribosomal protein L17 [Arabidopsis thaliana]       58   7e-07
emb|CAB89353.1| ribsomal protein-like [Arabidopsis thaliana]           58   7e-07
gb|ACJ84008.1| unknown [Medicago truncatula]                           58   9e-07

>ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/58 (60%), Positives = 36/58 (62%)
 Frame = +3

Query: 87  RTMVSQLVKHERIETTITKVSAYLFYHFIQFL*NYCLFFLQAKEVRRLADNMVQLGKE 260
           RTMVSQLVKHERIETT+TK                      AKEVRRLADNMVQLGKE
Sbjct: 19  RTMVSQLVKHERIETTVTK----------------------AKEVRRLADNMVQLGKE 54


>ref|NP_568216.1| Ribosomal protein L17 family protein [Arabidopsis thaliana]
           gi|21592350|gb|AAM64301.1| ribsomal protein-like
           [Arabidopsis thaliana] gi|27808520|gb|AAO24540.1|
           At5g09770 [Arabidopsis thaliana]
           gi|110736202|dbj|BAF00072.1| ribsomal protein - like
           [Arabidopsis thaliana] gi|332004061|gb|AED91444.1|
           Ribosomal protein L17 family protein [Arabidopsis
           thaliana]
          Length = 160

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/58 (58%), Positives = 36/58 (62%)
 Frame = +3

Query: 87  RTMVSQLVKHERIETTITKVSAYLFYHFIQFL*NYCLFFLQAKEVRRLADNMVQLGKE 260
           RTMVSQLVKHERIETT+TK                      AKEVRRLADNM+QLGKE
Sbjct: 19  RTMVSQLVKHERIETTVTK----------------------AKEVRRLADNMIQLGKE 54


>dbj|BAB09535.1| 50S ribosomal protein L17 [Arabidopsis thaliana]
          Length = 140

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/58 (58%), Positives = 36/58 (62%)
 Frame = +3

Query: 87  RTMVSQLVKHERIETTITKVSAYLFYHFIQFL*NYCLFFLQAKEVRRLADNMVQLGKE 260
           RTMVSQLVKHERIETT+TK                      AKEVRRLADNM+QLGKE
Sbjct: 48  RTMVSQLVKHERIETTVTK----------------------AKEVRRLADNMIQLGKE 83


>emb|CAB89353.1| ribsomal protein-like [Arabidopsis thaliana]
          Length = 156

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/58 (58%), Positives = 36/58 (62%)
 Frame = +3

Query: 87  RTMVSQLVKHERIETTITKVSAYLFYHFIQFL*NYCLFFLQAKEVRRLADNMVQLGKE 260
           RTMVSQLVKHERIETT+TK                      AKEVRRLADNM+QLGKE
Sbjct: 19  RTMVSQLVKHERIETTVTK----------------------AKEVRRLADNMIQLGKE 54


>gb|ACJ84008.1| unknown [Medicago truncatula]
          Length = 162

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/58 (60%), Positives = 36/58 (62%)
 Frame = +3

Query: 87  RTMVSQLVKHERIETTITKVSAYLFYHFIQFL*NYCLFFLQAKEVRRLADNMVQLGKE 260
           RTMVSQLV+HERIETTITK                      AKEVRRLADNMVQLGKE
Sbjct: 19  RTMVSQLVRHERIETTITK----------------------AKEVRRLADNMVQLGKE 54