BLASTX nr result

ID: Coptis21_contig00013798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013798
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    86   3e-15
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               86   3e-15
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    86   3e-15
ref|XP_003537916.1| PREDICTED: B3 domain-containing transcriptio...    82   3e-14

>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = -2

Query: 298 HPSFEVAMKFQYVKHGFL-PLPKHFTRKYLRGMFNYVTLKLSDEREWEVKCIFGEGRCRF 122
           +P F V ++  YV  GFL  +P  F R +L  +  +VTL++SD ++W V+C F +G+ + 
Sbjct: 212 NPFFRVILRPSYVYRGFLLHIPSSFARTFLNTVTGFVTLQVSDGKQWPVRCSFKDGKAKL 271

Query: 121 SQGWSEVMRETNMKEGDLCVFELIKKKAGVFRVYVCHELE 2
            QGW+E + E N++EGD+C+FELI  K  V +V V   LE
Sbjct: 272 GQGWTEFVWENNLEEGDVCIFELIHAKEIVLKVAVFRVLE 311


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/100 (38%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -2

Query: 298 HPSFEVAMKFQYVKHGFL-PLPKHFTRKYLRGMFNYVTLKLSDEREWEVKCIFGEGRCRF 122
           +P   V ++  YV   FL  +P  F  KYL G+  ++ L+ SD ++W V+C+ GE R + 
Sbjct: 298 NPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKL 357

Query: 121 SQGWSEVMRETNMKEGDLCVFELIKKKAGVFRVYVCHELE 2
           S+GW+E +++ N++EGD+CVFELI  +  V +V +   L+
Sbjct: 358 SKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLD 397


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/100 (38%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -2

Query: 298 HPSFEVAMKFQYVKHGFL-PLPKHFTRKYLRGMFNYVTLKLSDEREWEVKCIFGEGRCRF 122
           +P   V ++  YV   FL  +P  F  KYL G+  ++ L+ SD ++W V+C+ GE R + 
Sbjct: 246 NPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKL 305

Query: 121 SQGWSEVMRETNMKEGDLCVFELIKKKAGVFRVYVCHELE 2
           S+GW+E +++ N++EGD+CVFELI  +  V +V +   L+
Sbjct: 306 SKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLD 345


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/100 (38%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -2

Query: 298 HPSFEVAMKFQYVKHGFL-PLPKHFTRKYLRGMFNYVTLKLSDEREWEVKCIFGEGRCRF 122
           +P   V ++  YV   FL  +P  F  KYL G+  ++ L+ SD ++W V+C+ GE R + 
Sbjct: 454 NPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKL 513

Query: 121 SQGWSEVMRETNMKEGDLCVFELIKKKAGVFRVYVCHELE 2
           S+GW+E +++ N++EGD+CVFELI  +  V +V +   L+
Sbjct: 514 SKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLD 553


>ref|XP_003537916.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 431

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -2

Query: 298 HPSFEVAMKFQYVKHG-FLPLPKHFTRKYLRGMFNYVTLKLSDEREWEVKCIFGEGRCRF 122
           +P   V ++  Y+  G  + LP  F  K+L G+  ++ L++S+ R+W V+C++  GR + 
Sbjct: 295 NPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISNGRQWPVRCLYKGGRAKL 354

Query: 121 SQGWSEVMRETNMKEGDLCVFELIKKKAGVFRVYVCHELE 2
           SQGW E   E N+ EGD+CVFEL++ K  V +V + H  E
Sbjct: 355 SQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVTIFHVTE 394


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