BLASTX nr result

ID: Coptis21_contig00013797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013797
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      307   3e-81
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   291   1e-76
ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   291   1e-76
ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm...   291   1e-76

>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  307 bits (786), Expect = 3e-81
 Identities = 157/222 (70%), Positives = 177/222 (79%), Gaps = 3/222 (1%)
 Frame = +2

Query: 29  MAFPDLVRPSSLHFQTNSLNKIFSSP---TRSVLKSPKYFTKWVSDIPAKSLNFXXXXXX 199
           MAFP L  PSSL  +T   + +   P   +   +++P  FTKWV D  +KSLNF      
Sbjct: 1   MAFPHL--PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTKWVLDFRSKSLNFAFSGAL 58

Query: 200 XXXXXXXXXXXXEAKVGVNKPELLPKEFTSVIDVAGFLTPGQEIRLAQEISDLEKDTGFK 379
                       +AKVGVNKPELLPKEFT+VIDVAGFL+ GQE RLA+EISD+EKDTGFK
Sbjct: 59  ALGLSLPGVGVADAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFK 118

Query: 380 LRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLA 559
           LRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFNVGA+VDLDIPRSFWSRLA
Sbjct: 119 LRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLA 178

Query: 560 GKYGNMFYWKEQGEDASIEAAVMAISSCLKEPVGASNCSEVQ 685
           GKYGNMFYWKE+GEDASIEAAVMAISSCL+EPVG +NCSEV+
Sbjct: 179 GKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 220


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  301 bits (770), Expect = 2e-79
 Identities = 156/222 (70%), Positives = 176/222 (79%), Gaps = 3/222 (1%)
 Frame = +2

Query: 29  MAFPDLVRPSSLHFQTNSLNKIFSSP---TRSVLKSPKYFTKWVSDIPAKSLNFXXXXXX 199
           MAFP L  PSSL  +T   + +   P   +   +++P  FT WV D  +KSLNF      
Sbjct: 1   MAFPHL--PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTNWVLDFRSKSLNFAFSGAL 58

Query: 200 XXXXXXXXXXXXEAKVGVNKPELLPKEFTSVIDVAGFLTPGQEIRLAQEISDLEKDTGFK 379
                       +AKVGVNKPELLPKEFT+VIDVAGFL+ GQE RLA+EISD+EKDTGFK
Sbjct: 59  ALGVGVA-----DAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFK 113

Query: 380 LRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLA 559
           LRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFNVGA+VDLDIPRSFWSRLA
Sbjct: 114 LRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLA 173

Query: 560 GKYGNMFYWKEQGEDASIEAAVMAISSCLKEPVGASNCSEVQ 685
           GKYGNMFYWKE+GEDASIEAAVMAISSCL+EPVG +NCSEV+
Sbjct: 174 GKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 215


>ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  291 bits (745), Expect = 1e-76
 Identities = 147/197 (74%), Positives = 164/197 (83%), Gaps = 2/197 (1%)
 Frame = +2

Query: 101 SPTRSVLKSPKY--FTKWVSDIPAKSLNFXXXXXXXXXXXXXXXXXXEAKVGVNKPELLP 274
           SP  S L S KY  F+  +  +P KSL+F                  +AKVGVNKPELLP
Sbjct: 32  SPPSSPLPSQKYTDFSHRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLP 91

Query: 275 KEFTSVIDVAGFLTPGQEIRLAQEISDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDR 454
           KEFTSVIDVAGFL+ GQEIRL QEI+D+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDR
Sbjct: 92  KEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDR 151

Query: 455 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAI 634
           TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKE+GED+SIE+AVMAI
Sbjct: 152 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAI 211

Query: 635 SSCLKEPVGASNCSEVQ 685
           SSCL+EPVGA+NCSE++
Sbjct: 212 SSCLREPVGANNCSEIK 228


>ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  291 bits (745), Expect = 1e-76
 Identities = 147/197 (74%), Positives = 164/197 (83%), Gaps = 2/197 (1%)
 Frame = +2

Query: 101 SPTRSVLKSPKY--FTKWVSDIPAKSLNFXXXXXXXXXXXXXXXXXXEAKVGVNKPELLP 274
           SP  S L S KY  F+  +  +P KSL+F                  +AKVGVNKPELLP
Sbjct: 32  SPPSSPLPSQKYTDFSHRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLP 91

Query: 275 KEFTSVIDVAGFLTPGQEIRLAQEISDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDR 454
           KEFTSVIDVAGFL+ GQEIRL QEI+D+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDR
Sbjct: 92  KEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDR 151

Query: 455 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAI 634
           TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKE+GED+SIE+AVMAI
Sbjct: 152 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAI 211

Query: 635 SSCLKEPVGASNCSEVQ 685
           SSCL+EPVGA+NCSE++
Sbjct: 212 SSCLREPVGANNCSEIK 228


>ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis]
           gi|223541360|gb|EEF42911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  291 bits (745), Expect = 1e-76
 Identities = 154/224 (68%), Positives = 172/224 (76%), Gaps = 6/224 (2%)
 Frame = +2

Query: 29  MAFPDLVRPSSLHFQTNSLNKIF------SSPTRSVLKSPKYFTKWVSDIPAKSLNFXXX 190
           MAF  L   SSL  +  SL   F      SSP   +  S K F+ WV D  +K+L F   
Sbjct: 1   MAFLHL--SSSLTLRGTSLRPAFKIPVTASSPIFPIQNSTK-FSNWVVDFRSKTLKFLLS 57

Query: 191 XXXXXXXXXXXXXXXEAKVGVNKPELLPKEFTSVIDVAGFLTPGQEIRLAQEISDLEKDT 370
                          EAKVGVNKPELLPKEFT+VIDVAGFL+ GQE RLAQEI D+EKDT
Sbjct: 58  GALTLGLSLSGVEFAEAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAQEIQDIEKDT 117

Query: 371 GFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWS 550
           GFKLRVLAQNYPDTPGLAIKDFW+VDDRTIVFVADPTFGNILNFNVGA++DLDIPRSFWS
Sbjct: 118 GFKLRVLAQNYPDTPGLAIKDFWRVDDRTIVFVADPTFGNILNFNVGASIDLDIPRSFWS 177

Query: 551 RLAGKYGNMFYWKEQGEDASIEAAVMAISSCLKEPVGASNCSEV 682
           RLAGKYGN+FYWKE+GEDASIE+AVMAIS+CL+EPVG +NCSE+
Sbjct: 178 RLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNCSEL 221