BLASTX nr result

ID: Coptis21_contig00013794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013794
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arab...    65   6e-09
ref|NP_001190749.1| uncharacterized protein [Arabidopsis thalian...    62   4e-08
ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana] ...    62   4e-08
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    62   6e-08

>ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp.
           lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein
           ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
 Frame = +2

Query: 38  GLLCTISPLVFLEVALRTFFL--KHLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFR 211
           G LC +S +   E  +R++FL  + L FC G SDYKWS ++VLVSQ   + +GT+A   R
Sbjct: 235 GFLCFLSAITLAEAMVRSYFLQTRSLGFCNGDSDYKWSTALVLVSQTAAVAIGTVAPASR 294

Query: 212 LFFVASQLNPFKPEEN--------ASWIEWTCDQFQAFQVFSKLLLNWKICSG--IMKTC 361
                +   PF+ +++        + W+E   ++        +  LN+ +  G    K  
Sbjct: 295 WLKAVNLRCPFRTKKSLKDELRVESYWVECLAEK-------KERPLNFWMLHGRRSRKLA 347

Query: 362 HVLEDIVIHVLFATEIGLNRMDKVVIFLT 448
           H L  +++ +  AT+ G+    K + F+T
Sbjct: 348 HDLNRLMLDICIATQYGIVLSSKFLRFIT 376


>ref|NP_001190749.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332658470|gb|AEE83870.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 647

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
 Frame = +2

Query: 38  GLLCTISPLVFLEVALRTFFL--KHLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFR 211
           G LC +  +   E  +R++FL  + L FC G SDYKWS ++VLVSQ   + +GT+A   R
Sbjct: 235 GFLCFLIAITLAEAMVRSYFLQPRSLGFCNGDSDYKWSTTLVLVSQTAAVAIGTVAPASR 294

Query: 212 LFFVASQLNPFKPEEN--------ASWIEWTCDQFQAFQVFSKLLLNWKI---CSGIMKT 358
                +   PF+ +++        + W+E   ++ +      + L  W +   CS   K 
Sbjct: 295 WLKAVNFRCPFRNKKSLKDELRVESYWVECLAEKKE------RPLNFWMLHGRCS--RKL 346

Query: 359 CHVLEDIVIHVLFATEIGLNRMDKVVIFLT 448
            H L  +++ +  AT+ G+    K + F+T
Sbjct: 347 AHDLNRLMLDICIATQYGIVLASKFLRFIT 376


>ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana]
           gi|16323155|gb|AAL15312.1| AT4g17250/dl4660w
           [Arabidopsis thaliana] gi|23506021|gb|AAN28870.1|
           At4g17250/dl4660w [Arabidopsis thaliana]
           gi|332658469|gb|AEE83869.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 741

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
 Frame = +2

Query: 38  GLLCTISPLVFLEVALRTFFL--KHLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFR 211
           G LC +  +   E  +R++FL  + L FC G SDYKWS ++VLVSQ   + +GT+A   R
Sbjct: 235 GFLCFLIAITLAEAMVRSYFLQPRSLGFCNGDSDYKWSTTLVLVSQTAAVAIGTVAPASR 294

Query: 212 LFFVASQLNPFKPEEN--------ASWIEWTCDQFQAFQVFSKLLLNWKI---CSGIMKT 358
                +   PF+ +++        + W+E   ++ +      + L  W +   CS   K 
Sbjct: 295 WLKAVNFRCPFRNKKSLKDELRVESYWVECLAEKKE------RPLNFWMLHGRCS--RKL 346

Query: 359 CHVLEDIVIHVLFATEIGLNRMDKVVIFLT 448
            H L  +++ +  AT+ G+    K + F+T
Sbjct: 347 AHDLNRLMLDICIATQYGIVLASKFLRFIT 376


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +2

Query: 32  AVGLLCTISPLVFLEVALRTFFLK-HLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITF 208
           A G LC +S  + +E  +R++ +    +FC G SDYKWSV+++L+SQ + + +GT+   F
Sbjct: 235 ASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAF 294

Query: 209 RLFFVASQLNPFKPEENASWIEWTCDQFQAFQVFSKLLLNWKIC 340
           R F       P K  ++        D+F+  + + + L+ W+ C
Sbjct: 295 RWFVAILLRCPKKGGKSFK------DEFKVEKYWVQRLVEWRGC 332


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +2

Query: 32  AVGLLCTISPLVFLEVALRTFFLK-HLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITF 208
           A G LC +S  + +E  +R++ +    +FC G SDYKWSV+++L+SQ + + +GT+   F
Sbjct: 235 ASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAF 294

Query: 209 RLFFVASQLNPFKPEENASWIEWTCDQFQAFQVFSKLLLNWKIC 340
           R F       P K  ++        D+F+  + + + L+ W+ C
Sbjct: 295 RWFVAILLRCPKKGGKSFK------DEFKVEKYWVQRLVEWRGC 332


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