BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013793
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   135   3e-29
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   132   2e-28
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   132   2e-28
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-28
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   119   2e-24

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  135 bits (339), Expect = 3e-29
 Identities = 112/372 (30%), Positives = 177/372 (47%), Gaps = 8/372 (2%)
 Frame = +3

Query: 261  PLQFSDHLPWLIVPFVNNINNITTYTSLAFDDTKDVGFFSLRDGKVYKAELPELSNR-RI 437
            P      LPWL++P   + +N +              FFSL   K +   LPE+S R R 
Sbjct: 44   PNHLPPQLPWLMLPQSQSQSNQSRRA-----------FFSLSTNKFHFLNLPEVSYRKRH 92

Query: 438  CGSFPGGWLMTVHENSQVQLFCPLSLSSRVIHLPPLTKFPGVLNTIERKENEEDDVLSLF 617
            CGS   GWLM + +   + L  PL+ +   + LPPL+ FP V++          D+   +
Sbjct: 93   CGS-SHGWLMILDDTPTILLINPLTRAK--LSLPPLSSFPNVISF------NYSDIGREY 143

Query: 618  YTVSAVPRDMLKSSKVMRDTYIFKVAMSSSSVSEGT--IIMALQATDMSLAFYKIGGDRQ 791
               + +   +  S + MRD++I KV +SSS + +    +I  L  TD  LA+ +  GD+ 
Sbjct: 144  ALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTD-DLAYCR-NGDKS 201

Query: 792  VWTPIAQAVGHGMLHDLTYYKGKFYAXXXXXXXXXXXXLEGTQEETPDTSTSLEKI--IN 965
             W+ +  A       D+ +  G FYA             +  Q    D S+   ++  + 
Sbjct: 202  -WSLVENA--RSFCEDVIFVNGMFYAVN-----------KAGQIVICDISSDSPRVSFME 247

Query: 966  YPPGDIAPQHYILESSGDLLVVRRYVARQRNAKINNDGDKARQFPH---KTVGFKVFKVE 1136
             P        Y++ S  +LL+V RY+       +  + D     PH   +T+ F+VF+++
Sbjct: 248  TPRQAGGDMQYLVNSGDELLLVTRYL------DLEYEFDHPDMEPHLIYRTIRFEVFRLD 301

Query: 1137 FGTPCKWVTVENLGDHSLFLGYNSSFSVLSSKFPGCKPNCIYFTDDLILYFYRCKFGGQD 1316
            +  P +W+ +  LGD +LF+G NSS S+ ++ F GC  NCIY+TDD +   Y   FG  D
Sbjct: 302  WNGP-QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHD 360

Query: 1317 FGIFHLGDGSIE 1352
             GIF L D +IE
Sbjct: 361  LGIFKLCDETIE 372


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  132 bits (332), Expect = 2e-28
 Identities = 108/330 (32%), Positives = 156/330 (47%), Gaps = 3/330 (0%)
 Frame = +3

Query: 372  FFSLRDGKVYKAELPELSNRRICGSFPGGWLMTVHENSQVQLFCPLSLSSRVIHLPPLTK 551
            FFSL   K +  +LPE S+RR       GWL+ + E  ++ L  PL+ S   +HLPPL+ 
Sbjct: 67   FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSK--VHLPPLST 124

Query: 552  FPGVLNTIERKENEEDDVLSLFYTVSAVPRDML-KSSKVMRDTYIFKVAMSSSSV--SEG 722
            FP V+         E       Y +     D+  +S K MRD++I K  +SSS    S+ 
Sbjct: 125  FPNVVRFNFADVGRE-------YALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF 177

Query: 723  TIIMALQATDMSLAFYKIGGDRQVWTPIAQAVGHGMLHDLTYYKGKFYAXXXXXXXXXXX 902
              ++ L  T   LA  +   D   WT +  A  +    D+ +++G FYA           
Sbjct: 178  IAVVILNQTG-DLALCRKSDDS--WTFLEDAQSYA--EDVIFHRGLFYAVNKYGSIAVCD 232

Query: 903  XLEGTQEETPDTSTSLEKIINYPPGDIAPQHYILESSGDLLVVRRYVARQRNAKINNDGD 1082
                        S+    II  P        Y++ES  +LL+V RY+    + + +    
Sbjct: 233  V---------SGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTS- 282

Query: 1083 KARQFPHKTVGFKVFKVEFGTPCKWVTVENLGDHSLFLGYNSSFSVLSSKFPGCKPNCIY 1262
                  ++T  F+V +++   P +W  V +LGD +LFLG N S S+ S  FPGCK NCIY
Sbjct: 283  ----LIYRTTRFQVCRLDLKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIY 337

Query: 1263 FTDDLILYFYRCKFGGQDFGIFHLGDGSIE 1352
            +TDD     Y    G QD GIF+L DGSIE
Sbjct: 338  YTDDYSEDNYDGIGGEQDLGIFNLEDGSIE 367


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  132 bits (332), Expect = 2e-28
 Identities = 108/330 (32%), Positives = 156/330 (47%), Gaps = 3/330 (0%)
 Frame = +3

Query: 372  FFSLRDGKVYKAELPELSNRRICGSFPGGWLMTVHENSQVQLFCPLSLSSRVIHLPPLTK 551
            FFSL   K +  +LPE S+RR       GWL+ + E  ++ L  PL+ S   +HLPPL+ 
Sbjct: 67   FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSK--VHLPPLST 124

Query: 552  FPGVLNTIERKENEEDDVLSLFYTVSAVPRDML-KSSKVMRDTYIFKVAMSSSSV--SEG 722
            FP V+         E       Y +     D+  +S K MRD++I K  +SSS    S+ 
Sbjct: 125  FPNVVRFNFADVGRE-------YALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF 177

Query: 723  TIIMALQATDMSLAFYKIGGDRQVWTPIAQAVGHGMLHDLTYYKGKFYAXXXXXXXXXXX 902
              ++ L  T   LA  +   D   WT +  A  +    D+ +++G FYA           
Sbjct: 178  IAVVILNQTG-DLALCRKSDDS--WTFLEDAQSYS--EDVIFHRGLFYAVNKYGSIAVCD 232

Query: 903  XLEGTQEETPDTSTSLEKIINYPPGDIAPQHYILESSGDLLVVRRYVARQRNAKINNDGD 1082
                        S+    II  P        Y++ES  +LL+V RY+    + + +    
Sbjct: 233  V---------SGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTS- 282

Query: 1083 KARQFPHKTVGFKVFKVEFGTPCKWVTVENLGDHSLFLGYNSSFSVLSSKFPGCKPNCIY 1262
                  ++T  F+V +++   P +W  V +LGD +LFLG N S S+ S  FPGCK NCIY
Sbjct: 283  ----LIYRTTRFQVCRLDSKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIY 337

Query: 1263 FTDDLILYFYRCKFGGQDFGIFHLGDGSIE 1352
            +TDD     Y    G QD GIF+L DGSIE
Sbjct: 338  YTDDYSEDNYDGIGGEQDLGIFNLEDGSIE 367


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  131 bits (329), Expect = 5e-28
 Identities = 112/370 (30%), Positives = 169/370 (45%), Gaps = 6/370 (1%)
 Frame = +3

Query: 261  PLQFSDHLPWLIVPFVNNINNITTYTSLAFDDTKDVGFFSLRDGKVYKAELPELSNRRI- 437
            P      LPWL++P   + +N ++Y +          FF+L   K +   LPE S+R+  
Sbjct: 44   PNHLPPQLPWLLLP--QSQSNQSSYRA----------FFNLSTYKFHSLNLPEASHRKKH 91

Query: 438  CGSFPGGWLMTVHENSQVQLFCPLSLSSRVIHLPPLTKFPGVLNTIERKENEEDDVLSLF 617
            CGS   GWL+ + ++  + +  PL+   R IHLP ++ FP V++        E      +
Sbjct: 92   CGS-SHGWLIILDDSPSILVINPLT--RRKIHLPAISSFPNVVSFDYANVGRE------Y 142

Query: 618  YTVSAVPRDMLKSSKVMRDTYIFKVAMSSSSVSEGT---IIMALQATDMSLAFYKIGGDR 788
              V+        S + MRD +I KV MSSS + +     + MA+  +   LA+ K G + 
Sbjct: 143  LLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDE- 201

Query: 789  QVWTPIAQAVGHGMLHDLTYYKGKFYAXXXXXXXXXXXXLEGTQEETPDTSTSLEKI--I 962
              W  +  +       D+ Y+ G FYA             +  Q    D + +  K+  I
Sbjct: 202  -CWNIVENS--RSFSEDVIYFNGLFYAVN-----------KAGQIVVCDVNGNSPKVSFI 247

Query: 963  NYPPGDIAPQHYILESSGDLLVVRRYVARQRNAKINNDGDKARQFPHKTVGFKVFKVEFG 1142
              P        Y++ S   LL+V RY+       I         F +KT  F+VFK++  
Sbjct: 248  ETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDI---------FIYKTARFEVFKLDLN 298

Query: 1143 TPCKWVTVENLGDHSLFLGYNSSFSVLSSKFPGCKPNCIYFTDDLILYFYRCKFGGQDFG 1322
             P +W  V +LGD  LF+G NSS ++ +S   GC  +CIY+TDD     Y    G  D G
Sbjct: 299  GP-RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLG 357

Query: 1323 IFHLGDGSIE 1352
            IF L DGSIE
Sbjct: 358  IFKLSDGSIE 367


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
            gi|449485151|ref|XP_004157083.1| PREDICTED: F-box protein
            SKIP23-like [Cucumis sativus]
          Length = 392

 Score =  119 bits (297), Expect = 2e-24
 Identities = 109/368 (29%), Positives = 169/368 (45%), Gaps = 4/368 (1%)
 Frame = +3

Query: 261  PLQFSDHLPWLIVPFVNNINNITTYTSLAFDDTKDVGFFSLRDGKVYKAELPELSNR-RI 437
            P +    LP LI+P  +N                  G F+  D K++   LPE+S R R 
Sbjct: 43   PHRLPPQLPCLIIPLYHNCR---------------CGLFNFSDNKIHFLYLPEISLRKRP 87

Query: 438  CGSFPGGWLMTVHENSQVQLFCPLSLSSRVIHLPPLTKFPGVLNTIERKENEEDDVLSLF 617
            CGS   GWL  V E   + L  P + +   + LPPL+ FP V++    +   E      +
Sbjct: 88   CGS-SHGWLTIVDETPPILLLNPFTRAK--LWLPPLSTFPNVVSFDYSRVGRE------Y 138

Query: 618  YTVSAVPRDMLKSSKVMRDTYIFKVAMSSSSVSEGTII-MALQATDMSLAFYKIGGDRQV 794
               +       ++ + MRD+++ K+ +SSS  +    + +A+      LAF + GG    
Sbjct: 139  LIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNPNDFLAVAILNHSGDLAFCRSGGGS-- 196

Query: 795  WTPIAQAVGHGMLHDLTYYKGKFYAXXXXXXXXXXXXLEGTQEETPDTSTSLEKIINYPP 974
            WT +  A       D+ Y  G FYA            L G++ +    +T  +       
Sbjct: 197  WTFVDDAPSD--CEDVIYSDGVFYAVDKYGVVSLMD-LRGSRSQVSLVATERQLA----- 248

Query: 975  GDIAPQHYILESSGDLLVVRRYVARQRNAKINNDGDKARQFP--HKTVGFKVFKVEFGTP 1148
            GDI    Y+++   +LL+V RY+       I NDG +    P  ++TV F+VF++E+  P
Sbjct: 249  GDI---QYLVKLGQELLLVSRYL------DIVNDGMEDELIPVMYRTVRFEVFRMEWEGP 299

Query: 1149 CKWVTVENLGDHSLFLGYNSSFSVLSSKFPGCKPNCIYFTDDLILYFYRCKFGGQDFGIF 1328
             +W  VENL + +LF+G NSS +  ++ F     NCIY+TDD     Y+ +    D GIF
Sbjct: 300  -RWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQEQGEEPDMGIF 358

Query: 1329 HLGDGSIE 1352
             L D S E
Sbjct: 359  RLCDESFE 366