BLASTX nr result

ID: Coptis21_contig00013790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013790
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichoca...   103   1e-20
ref|XP_002333828.1| BED finger-nbs resistance protein [Populus t...   103   1e-20
ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...   103   2e-20
ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...   101   6e-20
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...   101   6e-20

>ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860585|gb|EEE98132.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 802

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/118 (43%), Positives = 74/118 (62%)
 Frame = -1

Query: 355 GMEMPTTRLIGSTADKILKMVWGYTVGDEFEKIGVYGMGGVGKTTIMKTISNQLVQERIR 176
           G    TT L+G   ++ +  +W + + D+   IG+YG+GGVGKT++++ I++QL+Q    
Sbjct: 25  GKAFQTTELVGRAFERNVSEIWSWLMKDDVLSIGIYGIGGVGKTSLLRHINDQLLQRPSS 84

Query: 175 FENVLWVTVSKDVDAQKLQNQIAKRVELDLSAEQDEAIXXXXXXXXXXRKGKFVLILD 2
           F+NV W+TV++D    KLQN IAK V+LDLS E+DE             K KFVLILD
Sbjct: 85  FQNVFWITVTQDFSIYKLQNLIAKAVDLDLSNEEDEKKRAVKLSNGLIAKKKFVLILD 142


>ref|XP_002333828.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222838647|gb|EEE77012.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 1153

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/118 (43%), Positives = 74/118 (62%)
 Frame = -1

Query: 355 GMEMPTTRLIGSTADKILKMVWGYTVGDEFEKIGVYGMGGVGKTTIMKTISNQLVQERIR 176
           G    TT L+G   ++ +  +W + + D+   IG+YG+GGVGKT++++ I++QL+Q    
Sbjct: 145 GKAFQTTELVGRAFERNVSEIWSWLMKDDVLSIGIYGIGGVGKTSLLRHINDQLLQRPSS 204

Query: 175 FENVLWVTVSKDVDAQKLQNQIAKRVELDLSAEQDEAIXXXXXXXXXXRKGKFVLILD 2
           F+NV W+TV++D    KLQN IAK V+LDLS E+DE             K KFVLILD
Sbjct: 205 FQNVFWITVTQDFSIYKLQNLIAKAVDLDLSNEEDEKKRAVNLSNGLIAKKKFVLILD 262


>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 929

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/118 (45%), Positives = 73/118 (61%)
 Frame = -1

Query: 355 GMEMPTTRLIGSTADKILKMVWGYTVGDEFEKIGVYGMGGVGKTTIMKTISNQLVQERIR 176
           G  +PTT+L+G       K +W + + DE   IG+YGMGGVGKTT++K I +QL + R  
Sbjct: 34  GDAVPTTKLVGQAFKDHKKTIWTWLMHDEVSTIGIYGMGGVGKTTLVKHIYDQLQKRRDS 93

Query: 175 FENVLWVTVSKDVDAQKLQNQIAKRVELDLSAEQDEAIXXXXXXXXXXRKGKFVLILD 2
           F NV W+TVS+D +  KLQ  IA+R+ LDLS E +E            +K K+VLILD
Sbjct: 94  FCNVYWITVSQDTNINKLQYSIARRIGLDLSNEDEELYRAAELSKELTKKQKWVLILD 151


>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/118 (44%), Positives = 72/118 (61%)
 Frame = -1

Query: 355 GMEMPTTRLIGSTADKILKMVWGYTVGDEFEKIGVYGMGGVGKTTIMKTISNQLVQERIR 176
           G  + TT+L+G  +D+  +M+W + + D+   +G+YGMGGVGKT+++  I NQL+Q    
Sbjct: 86  GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSS 145

Query: 175 FENVLWVTVSKDVDAQKLQNQIAKRVELDLSAEQDEAIXXXXXXXXXXRKGKFVLILD 2
           F  V WVTVS++    KLQ  IAK + LDLS E+DE             KGK VLILD
Sbjct: 146 FNYVFWVTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILD 203


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/118 (44%), Positives = 72/118 (61%)
 Frame = -1

Query: 355 GMEMPTTRLIGSTADKILKMVWGYTVGDEFEKIGVYGMGGVGKTTIMKTISNQLVQERIR 176
           G  + TT+L+G  +D+  +M+W + + D+   +G+YGMGGVGKT+++  I NQL+Q    
Sbjct: 217 GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSS 276

Query: 175 FENVLWVTVSKDVDAQKLQNQIAKRVELDLSAEQDEAIXXXXXXXXXXRKGKFVLILD 2
           F  V WVTVS++    KLQ  IAK + LDLS E+DE             KGK VLILD
Sbjct: 277 FNYVFWVTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILD 334


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