BLASTX nr result

ID: Coptis21_contig00013789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013789
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ85604.1| unknown [Medicago truncatula] gi|388492174|gb|AFK...   211   1e-52
ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago ...   211   2e-52
gb|AFK37542.1| unknown [Lotus japonicus]                              209   6e-52
ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [...   208   8e-52
ref|XP_002525357.1| nucleic acid binding protein, putative [Rici...   206   3e-51

>gb|ACJ85604.1| unknown [Medicago truncatula] gi|388492174|gb|AFK34153.1| unknown
           [Medicago truncatula] gi|388516031|gb|AFK46077.1|
           unknown [Medicago truncatula]
          Length = 222

 Score =  211 bits (537), Expect = 1e-52
 Identities = 124/222 (55%), Positives = 145/222 (65%), Gaps = 31/222 (13%)
 Frame = -1

Query: 667 MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLFESYGXXXXXXXXXXXXXXP 494
           MPR  +E+PAVRVYTVCDES+YLIV+NVPALGCG+++++LF +YG               
Sbjct: 1   MPRYKDESPAVRVYTVCDESRYLIVRNVPALGCGNDLMQLFSTYGEVEECKPMDAEDCEQ 60

Query: 493 FTDVYWIKFLQVSNARFAKRKLDESVFLGNKLHVSYASNFESLIDTKEKLECRRREVLAR 314
           FTDVYWIKF   SNARFAKRKLDE VFLGN+L VSYA +FESL DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFHLFSNARFAKRKLDEFVFLGNRLQVSYAPHFESLSDTKDKLEGRRKEVLAR 120

Query: 313 LN----------KSKGSIPSRASFVSEEFN------------------NKRVSSNEEYFT 218
           LN           S+  I S  S  SE  +                   + VSSNE+YF+
Sbjct: 121 LNPRRPKDTIASSSRPLITSNTSCQSEHLDPNQSSQEFEVRSNNSNLPKRTVSSNEDYFS 180

Query: 217 SSSMNNTVNFVRGKLDKIQSSG-HQESEHGIKKARVDNRRRI 95
           S SMN TV  VR KLDKIQSSG H ++    KKARVDNRRRI
Sbjct: 181 SHSMNQTVRVVRAKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222


>ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago truncatula]
           gi|355517583|gb|AES99206.1| hypothetical protein
           MTR_5g077780 [Medicago truncatula]
          Length = 222

 Score =  211 bits (536), Expect = 2e-52
 Identities = 124/222 (55%), Positives = 145/222 (65%), Gaps = 31/222 (13%)
 Frame = -1

Query: 667 MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLFESYGXXXXXXXXXXXXXXP 494
           MPR  +E+PAVRVYTVCDES+YLIV+NVPALGCG+++++LF +YG               
Sbjct: 1   MPRYKDESPAVRVYTVCDESRYLIVRNVPALGCGNDLMQLFSTYGEVEECKPMDAEDCEQ 60

Query: 493 FTDVYWIKFLQVSNARFAKRKLDESVFLGNKLHVSYASNFESLIDTKEKLECRRREVLAR 314
           FTDVYWIKF   SNARFAKRKLDE VFLGN+L VSYA +FESL DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFHLFSNARFAKRKLDEFVFLGNRLQVSYAPHFESLSDTKDKLEGRRKEVLAR 120

Query: 313 LN----------KSKGSIPSRASFVSEEFN------------------NKRVSSNEEYFT 218
           LN           S+  I S  S  SE  +                   + VSSNE+YF+
Sbjct: 121 LNPRRPKDTIASSSRPLITSNTSCQSEHLDPNQSSQEFEVRSNNSNLPKRTVSSNEDYFS 180

Query: 217 SSSMNNTVNFVRGKLDKIQSSG-HQESEHGIKKARVDNRRRI 95
           S SMN TV  VR KLDKIQSSG H ++    KKARVDNRRRI
Sbjct: 181 SHSMNQTVRVVRDKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222


>gb|AFK37542.1| unknown [Lotus japonicus]
          Length = 222

 Score =  209 bits (531), Expect = 6e-52
 Identities = 124/222 (55%), Positives = 146/222 (65%), Gaps = 31/222 (13%)
 Frame = -1

Query: 667 MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLFESYGXXXXXXXXXXXXXXP 494
           MPR  +E+PAV VYTVCDES+YLIV+NVPALGCGD++ +LF SYG              P
Sbjct: 1   MPRYKDESPAVCVYTVCDESRYLIVRNVPALGCGDDLRQLFSSYGEIEECHPMDAEDCEP 60

Query: 493 FTDVYWIKFLQVSNARFAKRKLDESVFLGNKLHVSYASNFESLIDTKEKLECRRREVLAR 314
           FTDVYWIKF   +NARFAKRKLD+ VFLGN+L VSYA +FESL DTK+KLE RRREVLAR
Sbjct: 61  FTDVYWIKFRLFNNARFAKRKLDDFVFLGNRLQVSYAPHFESLSDTKDKLEGRRREVLAR 120

Query: 313 LNK----------SKGSIPSRASFVSEEFNN------------------KRVSSNEEYFT 218
           LN           S+ SI S+ + +SE  ++                  + VSSNE+YF 
Sbjct: 121 LNPRRPQVTAASGSRPSITSKTTSLSENLDHTERDLAFEGRSHNGNLQKRTVSSNEDYFA 180

Query: 217 SSSMNNTVNFVRGKLDKIQSSG-HQESEHGIKKARVDNRRRI 95
           S SMN TV  VR KLDKIQSSG H +     KK+RVDNRRRI
Sbjct: 181 SHSMNQTVKVVRDKLDKIQSSGEHLQDGPVSKKSRVDNRRRI 222


>ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [Vitis vinifera]
           gi|297739067|emb|CBI28556.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  208 bits (530), Expect = 8e-52
 Identities = 122/226 (53%), Positives = 143/226 (63%), Gaps = 37/226 (16%)
 Frame = -1

Query: 661 RNETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLFESYGXXXXXXXXXXXXXXPFTDV 482
           R+E PAVRVYT+CDES+YLIV+NVPALGCGD++L LF SYG              PFTDV
Sbjct: 5   RDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLNLFASYGDIEECKPMDAEDCEPFTDV 64

Query: 481 YWIKFLQVSNARFAKRKLDESVFLGNKLHVSYASNFESLIDTKEKLECRRREVLARLNKS 302
           YWIKF  VSNARFAKRKLDE VFLGN+L V YA +FESL DTKEKLE RR+EVL+RLN  
Sbjct: 65  YWIKFRLVSNARFAKRKLDEFVFLGNRLKVEYAPHFESLSDTKEKLEGRRKEVLSRLNPG 124

Query: 301 KGSI-----------------PSRASFVSEE--FNNK-----------------RVSSNE 230
           +  +                 PS+ + +S++  FN +                  VSSN+
Sbjct: 125 RSKMPTVHNPDALGEPLLVKNPSQTNCISKQMSFNQRISGESDHVSRIKDSSITTVSSNQ 184

Query: 229 EYFTSSSMNNTVNFVRGKLDKIQSSG-HQESEHGIKKARVDNRRRI 95
           +YF S SMN TV  VR KLDKIQSS  H E+    KK RVDNRRRI
Sbjct: 185 DYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230


>ref|XP_002525357.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535320|gb|EEF36995.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 216

 Score =  206 bits (525), Expect = 3e-51
 Identities = 121/216 (56%), Positives = 147/216 (68%), Gaps = 25/216 (11%)
 Frame = -1

Query: 667 MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLFESYGXXXXXXXXXXXXXXP 494
           MPR  +E PA+RVYT+CDES+YLIV+NVPALGCGD++LKLF SYG               
Sbjct: 1   MPRYKDEAPAIRVYTICDESRYLIVRNVPALGCGDDLLKLFASYGDVEDFKPMDAEDCDQ 60

Query: 493 FTDVYWIKFLQVSNARFAKRKLDESVFLGNKLHVSYASNFESLIDTKEKLECRRREVLAR 314
           FTDVYWIKF  V NARFAKRKLDE VF+GN+L VSYA +FE+L DTK+KLE R +EVL+R
Sbjct: 61  FTDVYWIKFSLVCNARFAKRKLDEYVFMGNRLQVSYAPHFETLSDTKDKLEGRIKEVLSR 120

Query: 313 LN--KSKGS------IPSRASFVS-----------EEFNN---KRVSSNEEYFTSSSMNN 200
           LN  +SKGS        + AS ++            + N+    RVSSN+EYF S SMN 
Sbjct: 121 LNPGRSKGSRVQNPGASNEASLLAAVESAGSQHNKSQINDPPITRVSSNQEYFPSQSMNQ 180

Query: 199 TVNFVRGKLDKIQSSG-HQESEHGIKKARVDNRRRI 95
           TV+ VR KL+KIQSS  H ++    KK+RVDNRRRI
Sbjct: 181 TVSLVREKLNKIQSSSEHLQAVPASKKSRVDNRRRI 216


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