BLASTX nr result

ID: Coptis21_contig00013784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013784
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35502.1| unknown [Medicago truncatula]                          102   8e-20
ref|NP_174536.1| putative plastid developmental protein DAG [Ara...   102   1e-19
ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis...   101   2e-19
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...   101   2e-19
ref|XP_004134048.1| PREDICTED: DAG protein, chloroplastic-like [...   100   3e-19

>gb|AFK35502.1| unknown [Medicago truncatula]
          Length = 217

 Score =  102 bits (255), Expect = 8e-20
 Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +1

Query: 175 PSAGTRSSYYRLTEDFDNKDWVISTEEQVDESGDSTLSSLMF-DTYLSCPYPTAFGQMF- 348
           PS  T SS +R T          + + +V+ +G+ST S L   ++  S   PT    +F 
Sbjct: 29  PSQVTPSSSFRFT----------TVQCRVNRAGNSTYSPLNSGNSNFSERPPTDMAPLFP 78

Query: 349 --DRRHWFITMKRPGAEFLSVQKRINFYFHTLATIVGSEE-AKKRIYRIKCESMFFGFGA 519
             D  HW I M +PG E  S Q+ I+ Y  TLA ++GSEE AKK+IY + CE  +FGFG 
Sbjct: 79  GCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCER-YFGFGC 137

Query: 520 EIDETTSNKLKGMPGVLAVLPD 585
           EIDE TSNKL+G+PGVL VLPD
Sbjct: 138 EIDEETSNKLEGLPGVLFVLPD 159


>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score =  102 bits (254), Expect = 1e-19
 Identities = 65/144 (45%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
 Frame = +1

Query: 166 VFSPSAGTRSSYYRLTEDFDNKDWVISTEEQVDESGDSTLSSLMFDTYLSCPYPTAFGQM 345
           VFS + G  SS  R T          +   ++D SG S  S L   +  S   PT    +
Sbjct: 39  VFSHAVGFISSLNRFT----------TIRTRMDRSGGS-YSPLKSGSNFSDRAPTEMAPL 87

Query: 346 F---DRRHWFITMKRPGAEFLSVQKRINFYFHTLATIVGSEE-AKKRIYRIKCESMFFGF 513
           F   D  HW I M +PG E  + Q+ I+ Y  TLA I+GSEE AKK+IY + CE  +FGF
Sbjct: 88  FPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCER-YFGF 146

Query: 514 GAEIDETTSNKLKGMPGVLAVLPD 585
           G EIDE TSNKL+G+PGVL +LPD
Sbjct: 147 GCEIDEETSNKLEGLPGVLFILPD 170


>ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
           gi|147779193|emb|CAN67991.1| hypothetical protein
           VITISV_023920 [Vitis vinifera]
          Length = 233

 Score =  101 bits (252), Expect = 2e-19
 Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
 Frame = +1

Query: 256 QVDESGDSTLSSLMFDTYLSCPYPTAFGQMF---DRRHWFITMKRPGAEFLSVQKRINFY 426
           +V+ SGDS  S L   +  S   PT    +F   D  HW I M +PG E  + Q+ I+ Y
Sbjct: 64  RVNRSGDS-YSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCY 122

Query: 427 FHTLATIVGSEE-AKKRIYRIKCESMFFGFGAEIDETTSNKLKGMPGVLAVLPD 585
             TLA +VGSEE AKK+IY + CE  +FGFG EIDE TSNKL+G+PGVL VLPD
Sbjct: 123 IQTLAKVVGSEEEAKKKIYNVSCER-YFGFGCEIDEETSNKLEGLPGVLFVLPD 175


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score =  101 bits (251), Expect = 2e-19
 Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
 Frame = +1

Query: 256 QVDESGDSTLSSLMFDTYLSCPYPTAFGQMF---DRRHWFITMKRPGAEFLSVQKRINFY 426
           +V+ +G+S  S L   +  S   P     +F   D  HW I M +PG E  + Q+ I+ Y
Sbjct: 78  RVNRAGNSAYSPLNSGSNFSDRPPNEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCY 137

Query: 427 FHTLATIVGSEE-AKKRIYRIKCESMFFGFGAEIDETTSNKLKGMPGVLAVLPD 585
             TLA +VGSEE AKK+IY + CE  +FGFG EIDE TSNKL+G+PGVL VLPD
Sbjct: 138 IQTLAKVVGSEEEAKKKIYNVSCER-YFGFGCEIDEETSNKLEGLPGVLFVLPD 190


>ref|XP_004134048.1| PREDICTED: DAG protein, chloroplastic-like [Cucumis sativus]
           gi|449517983|ref|XP_004166023.1| PREDICTED: DAG protein,
           chloroplastic-like [Cucumis sativus]
          Length = 243

 Score =  100 bits (250), Expect = 3e-19
 Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 GDSTLSSLMFDTYLSCPYPTAFGQMF---DRRHWFITMKRPGAEFLSVQKRINFYFHTLA 441
           G+S+ S L  ++  +   PT    +F   D  HW I M +PG E  + Q+ I+ Y  TLA
Sbjct: 78  GNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLA 137

Query: 442 TIVGSEE-AKKRIYRIKCESMFFGFGAEIDETTSNKLKGMPGVLAVLPD 585
            IVGSEE AKKRIY + CE  +FGFG E+DE TSNKL+G+PGVL VLPD
Sbjct: 138 KIVGSEEEAKKRIYNVSCER-YFGFGCELDEETSNKLEGLPGVLFVLPD 185


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