BLASTX nr result

ID: Coptis21_contig00013782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013782
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273563.1| PREDICTED: uncharacterized RNA methyltransfe...   465   e-129
emb|CAN82187.1| hypothetical protein VITISV_031112 [Vitis vinifera]   455   e-126
ref|XP_002509532.1| conserved hypothetical protein [Ricinus comm...   437   e-120
ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransfe...   435   e-120
ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransfe...   435   e-120

>ref|XP_002273563.1| PREDICTED: uncharacterized RNA methyltransferase pc1998 [Vitis
            vinifera] gi|296082357|emb|CBI21362.3| unnamed protein
            product [Vitis vinifera]
          Length = 497

 Score =  465 bits (1196), Expect = e-129
 Identities = 224/282 (79%), Positives = 248/282 (87%), Gaps = 1/282 (0%)
 Frame = -2

Query: 915  FLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAPSSF 736
            FLWRNGGPRS+ H++HSVW NFQTS+NNIIFGNRWRHLLGE DFWEHVGGIDI+LAPSSF
Sbjct: 203  FLWRNGGPRSNVHLIHSVWANFQTSTNNIIFGNRWRHLLGEIDFWEHVGGIDIALAPSSF 262

Query: 735  GQANTRAFDSLLRKLQTYVPYGTTVTDLYAGAGVIGLSLAVARKCRSVKCVEINKESKLS 556
            GQANTRAFDSLLRKLQ YVPYG  V DLYAGAGVIGLSLA  RKCRSVKC+EINKE++LS
Sbjct: 263  GQANTRAFDSLLRKLQKYVPYGAAVADLYAGAGVIGLSLAATRKCRSVKCIEINKEARLS 322

Query: 555  FEKTVSRLPKSVDSSISWHQADTSIEPLSWLVGSDVVVVDPPRKGLDPSLINALQTLPSS 376
            FEKTV RLPKS+D++ISWH ADTSI PLSWL+GSDVVVVDPPRKGLDPSL++AL+TL  +
Sbjct: 323  FEKTVGRLPKSIDTTISWHHADTSIGPLSWLMGSDVVVVDPPRKGLDPSLVDALRTLSLA 382

Query: 375  KLKAKAFESSFLKDKDEKRPWILREREASVHVESKTAWERTGSLPKTLIYISCGWDSFKE 196
            + +A   E SF K K+EKRPWILR REASV +ESKT+ E   SLPKTLIYISCGW+SFKE
Sbjct: 383  EKRAMLTERSFSKVKNEKRPWILRAREASVQIESKTSPEEGQSLPKTLIYISCGWESFKE 442

Query: 195  DCRLLLS-STWRLEKAHGFNFFPGTQSIEVLAVFKRGPGVSL 73
            DC+ LLS   W L+KAHGFNFFPGTQSIEVLAVFKRGPG  L
Sbjct: 443  DCKSLLSRKEWHLDKAHGFNFFPGTQSIEVLAVFKRGPGAGL 484


>emb|CAN82187.1| hypothetical protein VITISV_031112 [Vitis vinifera]
          Length = 480

 Score =  455 bits (1170), Expect = e-126
 Identities = 223/287 (77%), Positives = 245/287 (85%), Gaps = 6/287 (2%)
 Frame = -2

Query: 915  FLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAPSSF 736
            FLWRNGGPRS+ H++HSVW NFQTS+NNIIFGNRWRHLLGE DFWEHVGGIDI+LAPSSF
Sbjct: 163  FLWRNGGPRSNVHLIHSVWANFQTSTNNIIFGNRWRHLLGEIDFWEHVGGIDIALAPSSF 222

Query: 735  GQANTRAFDSLLRKLQTYVPYGTTVTDLYAGAGVIGLSLAVARKCR-----SVKCVEINK 571
            GQANTRAFDSLLRKLQ YVPYG  V DLYAGAGVIGLSLA  RKCR     SVKC+EINK
Sbjct: 223  GQANTRAFDSLLRKLQKYVPYGAAVADLYAGAGVIGLSLAATRKCRQELRWSVKCIEINK 282

Query: 570  ESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLVGSDVVVVDPPRKGLDPSLINALQ 391
            E++LSFEKTV RLPKS+D +ISWH ADTSI PLSWL GSDVVVVDPPRKGLDPSL++AL+
Sbjct: 283  EARLSFEKTVGRLPKSIDXTISWHHADTSIGPLSWLXGSDVVVVDPPRKGLDPSLVDALR 342

Query: 390  TLPSSKLKAKAFESSFLKDKDEKRPWILREREASVHVESKTAWERTGSLPKTLIYISCGW 211
            TL  ++ +A   E SF K K+EKRPWILR  EASV +ESKT+ E   SLPKTLIYISCGW
Sbjct: 343  TLSLAEKRAMLTERSFSKVKNEKRPWILRAXEASVQIESKTSPEEGQSLPKTLIYISCGW 402

Query: 210  DSFKEDCRLLLS-STWRLEKAHGFNFFPGTQSIEVLAVFKRGPGVSL 73
            +SFKEDC+ LLS   W L+KAHGFNFFPGTQSIEVLAVFKRGPG  L
Sbjct: 403  ESFKEDCKSLLSRKEWHLDKAHGFNFFPGTQSIEVLAVFKRGPGAGL 449


>ref|XP_002509532.1| conserved hypothetical protein [Ricinus communis]
            gi|223549431|gb|EEF50919.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 518

 Score =  437 bits (1123), Expect = e-120
 Identities = 211/285 (74%), Positives = 243/285 (85%), Gaps = 4/285 (1%)
 Frame = -2

Query: 915  FLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAPSSF 736
            +LWRNGGPR++   +HS+W NFQTS+NNIIFGNRWRHLLG++DFWE VGGID+SLAPSSF
Sbjct: 220  YLWRNGGPRTAVRFIHSIWANFQTSTNNIIFGNRWRHLLGDQDFWERVGGIDMSLAPSSF 279

Query: 735  GQANTRAFDSLLRKLQTYVPYGTTVTDLYAGAGVIGLSLAVARKCRSVKCVEINKESKLS 556
            GQANTRAFD+LLRKLQ YVP G +V DLYAGAGVIGLSLA +RKCRSVKC+E+NK+SK+S
Sbjct: 280  GQANTRAFDALLRKLQKYVPLGASVADLYAGAGVIGLSLAASRKCRSVKCIEVNKQSKIS 339

Query: 555  FEKTVSRLPKSVDSSISWHQADTSIEPLSWLVGSDVVVVDPPRKGLDPSLINALQTLPSS 376
            FEK   RLPKSVDSSISW+QADTS+EPLSWL+GS+VV+VDPPRKGLD SL++AL T+ S 
Sbjct: 340  FEKAAERLPKSVDSSISWYQADTSVEPLSWLMGSEVVIVDPPRKGLDASLVDALLTISSL 399

Query: 375  KLKAKAFESSF---LKDKDEKRPWILREREASVHVESKTAWERTGSLPKTLIYISCGWDS 205
            + K K+  +SF    K KDEKRPWILR REASV + SKT  E   SLP+TLIYISCGW+S
Sbjct: 400  ERKPKSSPASFGHNSKVKDEKRPWILRAREASVEIGSKTTLEDPQSLPQTLIYISCGWES 459

Query: 204  FKEDCRLLLSS-TWRLEKAHGFNFFPGTQSIEVLAVFKRGPGVSL 73
            FKEDC+ LLSS  W LEKAHGFNFFPGTQSIE+LAVFKRG    L
Sbjct: 460  FKEDCKSLLSSKEWHLEKAHGFNFFPGTQSIEILAVFKRGQQAGL 504


>ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like,
           partial [Cucumis sativus]
          Length = 414

 Score =  435 bits (1119), Expect = e-120
 Identities = 213/281 (75%), Positives = 235/281 (83%), Gaps = 2/281 (0%)
 Frame = -2

Query: 915 FLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAPSSF 736
           FLW+NGG RS+ H+VHSVW NFQTS+NN+IFGNRWRHLLGERDFWEHVGGIDI L PSSF
Sbjct: 119 FLWKNGGVRSNTHLVHSVWANFQTSTNNVIFGNRWRHLLGERDFWEHVGGIDICLTPSSF 178

Query: 735 GQANTRAFDSLLRKLQTYVPYGTTVTDLYAGAGVIGLSLAVARKCRSVKCVEINKESKLS 556
           GQANT+AFDSLLRKLQ YVPYG +V DLYAGAGVIGLSLA  RKCRSVKCVE+NKESKLS
Sbjct: 179 GQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCVEVNKESKLS 238

Query: 555 FEKTVSRLPKSVDSSISWHQADTSIEPLSWLVGSDVVVVDPPRKGLDPSLINALQTLPSS 376
           FEKTV RLP  V+SSISWH ADTS EPLSW++GSDVVVVDPPRKGLD SL N L+ + S 
Sbjct: 239 FEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVVVVDPPRKGLDASLANMLRDISSF 298

Query: 375 KLKAKAFESSF-LKDKDEKRPWILREREASVHVESKTAWERTGSLPKTLIYISCGWDSFK 199
           K K K       L  KDEKRPW+LR RE +V + S T  E   SLP+TLIYISCGW+SFK
Sbjct: 299 KRKVKLLSKRLDLLLKDEKRPWVLRAREETVQIGSTTDSEPNQSLPQTLIYISCGWESFK 358

Query: 198 EDCRLLLSS-TWRLEKAHGFNFFPGTQSIEVLAVFKRGPGV 79
           EDC++LLS+  W LEKAHGFNFFPGTQSIEVLA+FKRG GV
Sbjct: 359 EDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKRGQGV 399


>ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like [Cucumis
            sativus]
          Length = 519

 Score =  435 bits (1119), Expect = e-120
 Identities = 213/281 (75%), Positives = 235/281 (83%), Gaps = 2/281 (0%)
 Frame = -2

Query: 915  FLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAPSSF 736
            FLW+NGG RS+ H+VHSVW NFQTS+NN+IFGNRWRHLLGERDFWEHVGGIDI L PSSF
Sbjct: 224  FLWKNGGVRSNTHLVHSVWANFQTSTNNVIFGNRWRHLLGERDFWEHVGGIDICLTPSSF 283

Query: 735  GQANTRAFDSLLRKLQTYVPYGTTVTDLYAGAGVIGLSLAVARKCRSVKCVEINKESKLS 556
            GQANT+AFDSLLRKLQ YVPYG +V DLYAGAGVIGLSLA  RKCRSVKCVE+NKESKLS
Sbjct: 284  GQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCVEVNKESKLS 343

Query: 555  FEKTVSRLPKSVDSSISWHQADTSIEPLSWLVGSDVVVVDPPRKGLDPSLINALQTLPSS 376
            FEKTV RLP  V+SSISWH ADTS EPLSW++GSDVVVVDPPRKGLD SL N L+ + S 
Sbjct: 344  FEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVVVVDPPRKGLDASLANMLRDISSF 403

Query: 375  KLKAKAFESSF-LKDKDEKRPWILREREASVHVESKTAWERTGSLPKTLIYISCGWDSFK 199
            K K K       L  KDEKRPW+LR RE +V + S T  E   SLP+TLIYISCGW+SFK
Sbjct: 404  KRKVKLLSKRLDLLLKDEKRPWVLRAREETVQIGSTTDSEPNQSLPQTLIYISCGWESFK 463

Query: 198  EDCRLLLSS-TWRLEKAHGFNFFPGTQSIEVLAVFKRGPGV 79
            EDC++LLS+  W LEKAHGFNFFPGTQSIEVLA+FKRG GV
Sbjct: 464  EDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKRGQGV 504


Top