BLASTX nr result

ID: Coptis21_contig00013773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013773
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531502.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
emb|CBI30080.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_003554129.1| PREDICTED: uncharacterized protein LOC100809...    64   2e-08
ref|XP_002308904.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|ABD28325.1| hypothetical protein MtrDRAFT_AC147961g12v2 [Medi...    58   8e-07

>ref|XP_002531502.1| conserved hypothetical protein [Ricinus communis]
           gi|223528889|gb|EEF30889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 56

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = +3

Query: 156 MPKSETQSEGKNQPPPGYPSENPEGKRNCCPRSKKKGDRGFIEGCLFA 299
           MPKSE Q   +NQPPPGYP++ P  K+ CCP +KKKGDRGFIEGCLFA
Sbjct: 1   MPKSEKQ---ENQPPPGYPTDTPTAKKKCCPNTKKKGDRGFIEGCLFA 45


>emb|CBI30080.3| unnamed protein product [Vitis vinifera]
          Length = 56

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/48 (70%), Positives = 36/48 (75%)
 Frame = +3

Query: 156 MPKSETQSEGKNQPPPGYPSENPEGKRNCCPRSKKKGDRGFIEGCLFA 299
           MPKS  Q   +NQPP GYP  NP   +NCCPRSK KGDRGFIEGCLFA
Sbjct: 1   MPKSNPQ---ENQPPQGYPPANPPTGKNCCPRSKSKGDRGFIEGCLFA 45


>ref|XP_003554129.1| PREDICTED: uncharacterized protein LOC100809835 [Glycine max]
          Length = 56

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 34/48 (70%)
 Frame = +3

Query: 156 MPKSETQSEGKNQPPPGYPSENPEGKRNCCPRSKKKGDRGFIEGCLFA 299
           M K ETQ    NQPPPGYP+ENP  KR      KK+G+RGFIEGCLFA
Sbjct: 1   MQKPETQG---NQPPPGYPTENPPAKRKLFFGLKKRGERGFIEGCLFA 45


>ref|XP_002308904.1| predicted protein [Populus trichocarpa] gi|222854880|gb|EEE92427.1|
           predicted protein [Populus trichocarpa]
          Length = 56

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = +3

Query: 156 MPKSETQSEGKNQPPPGYPSENPEGKRNCCPRSKKKGDRGFIEGCLFA 299
           MP  ETQ   +N+PP GYP + P   + C PR+KKKG+RGFIEGCLFA
Sbjct: 1   MPGLETQ---ENKPPAGYPVDTPTTGKKCFPRTKKKGERGFIEGCLFA 45


>gb|ABD28325.1| hypothetical protein MtrDRAFT_AC147961g12v2 [Medicago truncatula]
          Length = 57

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = +3

Query: 156 MPKSETQSEGKNQPPPGYPSE-NPEGKRNCCPRSKKKGDRGFIEGCLFA 299
           M K E Q   +NQPPPGYP++ +P  KR     +KKKGDRGFIEGCLFA
Sbjct: 1   MQKPEIQ---RNQPPPGYPTDQDPPTKRKLFISTKKKGDRGFIEGCLFA 46


Top