BLASTX nr result
ID: Coptis21_contig00013772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00013772
(1708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm... 229 2e-57
dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica... 142 4e-31
dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica... 140 1e-30
ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57... 128 4e-27
gb|ACU18766.1| unknown [Glycine max] 128 5e-27
>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
gi|223527710|gb|EEF29816.1| conserved hypothetical
protein [Ricinus communis]
Length = 690
Score = 229 bits (584), Expect = 2e-57
Identities = 155/472 (32%), Positives = 243/472 (51%), Gaps = 9/472 (1%)
Frame = -2
Query: 1704 KIDFSKEVWVEVVSLGERVFILSDYGCMSCSGTTSRMRGNQIYFTFPEDKKSLYVFCLED 1525
KIDFS+ W +V + + V L D+ +SC ++GN++YF + K LY + +ED
Sbjct: 241 KIDFSRMAWEKVECVKDSVLFLDDHYSISCPEIRPEIQGNRLYFVLKDHK--LYSYSIED 298
Query: 1524 ESLSV---YLPCPDLRKPFFSPFWLMPGKRVDNVSETGTGVEIKMDKTNDTVAIIKANVE 1354
S+S+ YLP PF S FW+MP R G+ ++D + K +
Sbjct: 299 RSISLVSPYLP----EDPFLS-FWVMPDLR----DYAGSRNREEIDACGE-----KQEIH 344
Query: 1353 ESKGPHWIDLSIDALLLTLKQLPSAVDYRNFRSTCKTLASSVPPVLDLIC--STTRCPWL 1180
+ H + + L+ +K+L + V Y N R+TC S PP+ +C + + P L
Sbjct: 345 QEAYFHRLPSDVITSLI-IKRL-NLVHYLNLRTTCSLFRSLAPPIQQKLCLQNHSSSPRL 402
Query: 1179 MYSNRDRSMCSFLDPVSNLTHCFYMPE-LLGARICFSSFGWLLMSKGDRSMFFFNPFDVV 1003
M+ +D ++C+F +P ++ ++P+ L G +IC+S GW +MS+G + FNP
Sbjct: 403 MFFEKD-NICTFFEPKNSDKCYLHLPQQLAGCQICYSKDGWFMMSRGKNFFYCFNPLTGE 461
Query: 1002 TIELPDLPR--DFAFSGLSFSCLPTSSDCIVFGASTLTCDLVNICYLRLGEEAWTWSQYR 829
++ D + + FS PTSSDCI S L +L+ I + G+ W Q
Sbjct: 462 ILKFTDTTSVLELELICVGFSTSPTSSDCIAVTISKLN-NLIEIYFAFRGDTKWVLEQID 520
Query: 828 NCIKIILCNNNPVFFDGAFYCLSYERHLGVFHLEGGSCDWTVL-RMAEPCKSVDQNYLVQ 652
+ N+PVF++G FY L + +L + + W VL + P QN+LV+
Sbjct: 521 DDTDFTFGGNSPVFYNGVFYYLGEKGNLAILEIIDDMVTWEVLWDLKSPRSHCHQNFLVE 580
Query: 651 CDGNLLSIYVGPKGKWVSIYELVTWQNELKWSPVYCLDDQMVLVSRSTSISMKAVTKGMK 472
CDGNLLS++VG V ++ L Q+++ W V L + MV VSRS+S S A GM+
Sbjct: 581 CDGNLLSVFVGEFEGSVEVFRLS--QSKMVWIRVENLGNYMVCVSRSSSFSSLAKAPGME 638
Query: 471 NKIYFPITFGGEDNYVYYSLATSAWHSSFDNYSRSDIYYYTQEQLHCTWIQP 316
NKI+FP +G +N V+YSL T+ +H SFD +Y ++EQL C W +P
Sbjct: 639 NKIFFPRFYG--ENIVFYSLDTNKFH-SFDRQKIPIEFYISREQLRCGWFEP 687
Score = 63.2 bits (152), Expect = 2e-07
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 24/268 (8%)
Frame = -2
Query: 1188 PWLMYSN----RDRSMCSFLDPVSNLTHCFYMPELLGARICF-SSFGWLLMS-KGDRSMF 1027
PWL+Y + D++ + DP T +PEL ++IC+ SS GW S + R F
Sbjct: 23 PWLVYCHGKGREDQTFWTISDP--KRTALRRIPEL-DSKICWASSHGWCFFSDRARRHFF 79
Query: 1026 FFNPFDVVTIELPDLPRDFAFSGLSFSCLPTSSDCIVFGASTLTCDLVNICYLRLGEEAW 847
+NP + I+LPDL S S P + C + D +I +L LG++ W
Sbjct: 80 LWNPLTLEKIDLPDLQVYNIISSGYISSSPRETGCKIL---LFVGDHPSIMFLELGDKEW 136
Query: 846 TWSQYR-----NCIKIILCNNNPVFFDGAFYCLSYERHLGVFHLEGGSCDWTVLR----- 697
T Y ++ +PV+ +G Y SY + +F L+ + VLR
Sbjct: 137 TEIDYSFLQTGKVVEYDHILRDPVYCNGKLYVFSYLTNSAIFVLDEINKGGVVLRSLNVE 196
Query: 696 ---MAEPCKSVD-QNYLVQCDGNLLSIYV---GPKGKWVSIYELVTWQNELKWSPVYCLD 538
+ +S++ + V+ G + I + G + V I + + W V C+
Sbjct: 197 YQNIMSQLESLNFRRCFVEASGEIYGINILLGGYDSRVVDIEVRKIDFSRMAWEKVECVK 256
Query: 537 DQMVLVSRSTSISMKAVTKGMK-NKIYF 457
D ++ + SIS + ++ N++YF
Sbjct: 257 DSVLFLDDHYSISCPEIRPEIQGNRLYF 284
>dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica Group]
gi|42408294|dbj|BAD09449.1| F-box protein family-like
[Oryza sativa Japonica Group] gi|125561733|gb|EAZ07181.1|
hypothetical protein OsI_29426 [Oryza sativa Indica
Group] gi|125603601|gb|EAZ42926.1| hypothetical protein
OsJ_27515 [Oryza sativa Japonica Group]
Length = 712
Score = 142 bits (357), Expect = 4e-31
Identities = 130/487 (26%), Positives = 211/487 (43%), Gaps = 30/487 (6%)
Frame = -2
Query: 1680 WVEVVSLG-ERVFILSDYGCMSCSGTTSRMRGNQIYFTFPE-DKKSLYVFCLEDESLSVY 1507
W V +G +R F++S SC ++GN +Y + D + LY FCL+D ++S +
Sbjct: 238 WERVEGIGNDRAFLISGTYAFSCPSIEGVLQGNCVYLVWSSCDSERLYKFCLDDMTISFH 297
Query: 1506 LPCPDLRKPFFSPFWLMPG--KRVDNVSETGTGVEI------KMDKTNDTVAIIKANVEE 1351
P K + FW +P + + E+ + K + ND + E
Sbjct: 298 QILPQPTKSWSRAFWAIPASTQSISMPQESTIPNNLLWRKPSKDNPPNDFDEHKEDGQEN 357
Query: 1350 SKGPHWIDLSIDALLLTLKQLPSAVDYRNFRSTCKTLASSVPPVLDLICSTTRCPWLMYS 1171
S P W L ++ L L + L S VD F + CK + VL+ I PWLM+
Sbjct: 358 SLRP-WDHLPVELLELIVSNL-SLVDRIRFPTVCKAWSE----VLNPIEQAKVWPWLMHI 411
Query: 1170 NRDRSMCSFLDPVSNLTHCFYMP--ELLGARICFSSF--GWLLMSKG--DRSMFFFNPFD 1009
++ C DP+ + + + + R F S GW+L S G +F NPF
Sbjct: 412 SKQDGTCKLFDPLRSENYNIQVTIFDTNEDRHIFRSSKDGWVLASAGIYGNDIFIINPFT 471
Query: 1008 VVTIELPDLPRDFAFSGLSFSCL-PTSSDCIVFGA-STLTCDLVNICYLRLGEEAWTWSQ 835
+E P L + ++G+SFS P DC FG S+ + ++ + GE W +
Sbjct: 472 EEIVEPPMLAFLYNYNGVSFSSSNPMCLDCAFFGINSSDSGKFLSTFTWQHGEPHWIEQE 531
Query: 834 YRNCIKIILCNNNPVFFDGAFYCLSYERHLGVFHLEGGSCDWTVLRMAEPCKSVDQN--- 664
+ + + NNPV FDG FYCL + +LGVF + S W +L EP V+ +
Sbjct: 532 FEYNVSFPVGYNNPVMFDGKFYCLGRKGNLGVF--DPTSNTWRILDKPEPI-HVEMDLFE 588
Query: 663 ---------YLVQCDGNLLSIYVGPKGKWVSIYELVTWQNELKWSPVYCLDDQMVLVSRS 511
YLV DG L+S+++ + +++L + E+ W V + + +
Sbjct: 589 EDHIGREFCYLVDMDGELISVFLRNANELPRVFKLN--RTEISWVEVEDIGGGALFLDYR 646
Query: 510 TSISMKAVTKGMKNKIYFPITFGGEDNYVYYSLATSAWHSSFDNYSRSDIYYYTQEQLHC 331
+S + + G N+IYFP + + V+Y + + SF Y E L+C
Sbjct: 647 SSYGVASPDGGNGNRIYFP-RYSKDGKPVFYDMNKKTYSPSF---------YGVIEPLNC 696
Query: 330 TWIQPTL 310
W+ P L
Sbjct: 697 VWVVPNL 703
>dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica Group]
gi|125603604|gb|EAZ42929.1| hypothetical protein
OsJ_27518 [Oryza sativa Japonica Group]
Length = 710
Score = 140 bits (353), Expect = 1e-30
Identities = 133/498 (26%), Positives = 213/498 (42%), Gaps = 32/498 (6%)
Frame = -2
Query: 1707 FKIDFSKEVWVEVVSLG-ERVFILSDYGCMSCSGTTSRMRGNQIYFTFPE-DKKSLYVFC 1534
F +D W V S+G +R F++S+ SC ++GN +Y + D + LY FC
Sbjct: 229 FCLDLELMSWERVESIGSDRTFLISENYTFSCPSIEGVLQGNCVYLVWSSCDSERLYKFC 288
Query: 1533 LEDESLSVYLPCPDLRKPFFSPFWLMPGKRVDNVSETGTGVEIKMDKTNDTVA------I 1372
L+D ++S KP+ FW +P E+ +EI DK N ++ I
Sbjct: 289 LDDMTISFQQILSQPTKPWCRAFWTVPAS-----IESILPMEIS-DKPNSLLSTKLSKDI 342
Query: 1371 IKANVEESKGPH-----WIDLSIDALLLTLKQLPSAVDYRNFRSTCKTLASSVPPVLDLI 1207
+ +++E G W L +D L L + L S VD F + C + P+
Sbjct: 343 LLNDLDEHDGLGNSLCLWEHLPVDLLELIVSNL-SLVDRIRFPTVCMAWSKVSNPIEQ-- 399
Query: 1206 CSTTRCPWLMYSNRDRSMCSFLDPVSNLTHCFYMP--ELLGARICFSSF--GWLLMSKG- 1042
PWLM+ ++ MC DP+ + + + R F S GW+ S G
Sbjct: 400 --AKVWPWLMHISKQDGMCRLFDPLRGEVYNMQVSIFDTNEDRHIFRSSKDGWVFTSAGI 457
Query: 1041 -DRSMFFFNPFDVVTIELPDLPRDFAFSGLSFSCL-PTSSDCIVFGA-STLTCDLVNICY 871
+F NPF +E P R + ++G+SFS P +C FG S+L+ +NI
Sbjct: 458 YGHDIFIINPFTEDIVEPPMFERRYHYNGVSFSSPNPMCPNCYFFGINSSLSGKFLNIHT 517
Query: 870 LRLGEEAWTWSQYRNCIKIILCNNNPVFFDGAFYCLSYERHLGVFHLEGGSCDWTVLRMA 691
R E W ++ + + NNPV F G FYCL + +LG F + S W +L
Sbjct: 518 WRHEETEWIEQRFEYDVPFPVGYNNPVMFCGKFYCLGRKGNLGAF--DPTSNTWEILDKP 575
Query: 690 EPC---KSVDQN--------YLVQCDGNLLSIYVGPKGKWVSIYELVTWQNELKWSPVYC 544
EP + QN YLV +G L+S+ + + +++L ++ W V
Sbjct: 576 EPIHVEMDLLQNDHRGREFCYLVDLEGELISVLLHNASEAPRVFKLDL--TKMSWVEVED 633
Query: 543 LDDQMVLVSRSTSISMKAVTKGMKNKIYFPITFGGEDNYVYYSLATSAWHSSFDNYSRSD 364
+ + + TS + + G N+IYFP + + V+Y + ++ SF
Sbjct: 634 IGGGALFLDHRTSHGVGSPDGGHGNRIYFP-RYSVDRKPVFYDMDNKMYYPSF------- 685
Query: 363 IYYYTQEQLHCTWIQPTL 310
Y E L+C W+ P L
Sbjct: 686 --YGHIEPLNCVWVVPNL 701
>ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
Length = 376
Score = 128 bits (322), Expect = 4e-27
Identities = 110/344 (31%), Positives = 165/344 (47%), Gaps = 22/344 (6%)
Frame = -2
Query: 1383 TVAIIKANVEESKGPHWIDLSIDALLLTLKQLPSAVDYRNFRSTCK---TLASSVPPVLD 1213
TVA +K+ E + W DL + L L +L A + R + C+ ++AS V V
Sbjct: 22 TVAEVKSENLEMQS--WADLPAELLESILSRLILADNIRA-SAVCRRWHSVASDVRVV-- 76
Query: 1212 LICSTTRCPWLMYSNRDRSMCSFLDPVSNLTHCFYMPELLGARICFSSFGWLLMSK-GDR 1036
+ PWLMY + F DPV TH F +PEL G+R+C++ GWLL+ +
Sbjct: 77 -----NQSPWLMYFPKFGDCYEFYDPVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTH 131
Query: 1035 SMFFFNPFDVVTIELPDLPR-DFAFSGLSFSCLPTSSDCIVFGASTLTCDLVNICYLRLG 859
+FFFNPF T EL LPR + + ++FSC PTS C++F ++ +V I G
Sbjct: 132 RVFFFNPF---TRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPG 188
Query: 858 EEAWTWSQYRNCIKIILCN-NNPVFFDGAFYCLSYERHLGVFHLEGGSCDWTVLRMAEP- 685
WT Y+N + + N VF +G FYCLS LGVF + C W+VL + P
Sbjct: 189 ATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVF--DPVECTWSVLAVPPPK 246
Query: 684 CKS-------VDQNYLVQCDGNLLSIYVGPKGKWVSIYELVTWQNELKWSPVYCLDDQMV 526
C ++ + +G++L IY + I++L Q +KW + LD +
Sbjct: 247 CPENFFAKNWWKGKFMTEHEGDILVIYTCCSENPI-IFKLD--QTLMKWEEMTTLDGVTL 303
Query: 525 LVSRSTSISMKAVTKGMKNKIYF-PITFGGE-------DNYVYY 418
S +S S + M+N +YF + F G+ D+Y YY
Sbjct: 304 FASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLDDYRYY 347
>gb|ACU18766.1| unknown [Glycine max]
Length = 376
Score = 128 bits (321), Expect = 5e-27
Identities = 110/344 (31%), Positives = 165/344 (47%), Gaps = 22/344 (6%)
Frame = -2
Query: 1383 TVAIIKANVEESKGPHWIDLSIDALLLTLKQLPSAVDYRNFRSTCK---TLASSVPPVLD 1213
TVA +K+ E + W DL + L L +L A + R + C+ ++AS V V
Sbjct: 22 TVAEVKSENLEMQS--WADLPAELLESILSRLILADNIRA-SAVCRRWHSVASDVRVV-- 76
Query: 1212 LICSTTRCPWLMYSNRDRSMCSFLDPVSNLTHCFYMPELLGARICFSSFGWLLMSK-GDR 1036
+ PWLMY + F DPV TH F +PEL G+R+C++ GWLL+ +
Sbjct: 77 -----NQSPWLMYFPKFGDCYEFYDPVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTH 131
Query: 1035 SMFFFNPFDVVTIELPDLPR-DFAFSGLSFSCLPTSSDCIVFGASTLTCDLVNICYLRLG 859
+FFFNPF T EL LPR + + ++FSC PTS C++F ++ +V I G
Sbjct: 132 RVFFFNPF---TRELIKLPRFEMIYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPG 188
Query: 858 EEAWTWSQYRNCIKIILCN-NNPVFFDGAFYCLSYERHLGVFHLEGGSCDWTVLRMAEP- 685
WT Y+N + + N VF +G FYCLS LGVF + C W+VL + P
Sbjct: 189 ATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVF--DPVECTWSVLAVPPPK 246
Query: 684 CKS-------VDQNYLVQCDGNLLSIYVGPKGKWVSIYELVTWQNELKWSPVYCLDDQMV 526
C ++ + +G++L IY + I++L Q +KW + LD +
Sbjct: 247 CPENFFAKNWWKGKFMTEHEGDILVIYTCCSENPI-IFKLD--QTLMKWEEMTTLDGVTL 303
Query: 525 LVSRSTSISMKAVTKGMKNKIYF-PITFGGE-------DNYVYY 418
S +S S + M+N +YF + F G+ D+Y YY
Sbjct: 304 FASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLDDYRYY 347