BLASTX nr result

ID: Coptis21_contig00013770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013770
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28311.3| unnamed protein product [Vitis vinifera]              118   8e-25
ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730...   118   8e-25
gb|AFK47834.1| unknown [Medicago truncatula]                          112   6e-23
ref|NP_001143877.1| uncharacterized protein LOC100276678 [Zea ma...   108   8e-22
ref|XP_002312822.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21

>emb|CBI28311.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  118 bits (296), Expect = 8e-25
 Identities = 66/120 (55%), Positives = 78/120 (65%)
 Frame = +3

Query: 15  MATRNAARHVSRRLMSSGGKVLGEEEKAAENVYIKKIEQEKMEKLARKGPKPEGQPTSTS 194
           MATR AAR+VSRRL SS GKVLGEEEKAAEN+YIKK EQEK+EKLARKGPKPE +P ++S
Sbjct: 50  MATRIAARYVSRRL-SSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSS 108

Query: 195 GSVADAKLSDSVADAKPXXXXXXXXXXXXDKYRNYXXXXXXXXXXXXXXWYLKATAKKPE 374
           G        ++V DA P            DK+RNY              WYLK+++KKPE
Sbjct: 109 G--------ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPE 160


>ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial isoform
           3 [Vitis vinifera] gi|225464932|ref|XP_002275077.1|
           PREDICTED: uncharacterized protein At2g27730,
           mitochondrial isoform 2 [Vitis vinifera]
           gi|225464934|ref|XP_002275041.1| PREDICTED:
           uncharacterized protein At2g27730, mitochondrial isoform
           1 [Vitis vinifera] gi|147785806|emb|CAN62125.1|
           hypothetical protein VITISV_037578 [Vitis vinifera]
          Length = 114

 Score =  118 bits (296), Expect = 8e-25
 Identities = 66/120 (55%), Positives = 78/120 (65%)
 Frame = +3

Query: 15  MATRNAARHVSRRLMSSGGKVLGEEEKAAENVYIKKIEQEKMEKLARKGPKPEGQPTSTS 194
           MATR AAR+VSRRL SS GKVLGEEEKAAEN+YIKK EQEK+EKLARKGPKPE +P ++S
Sbjct: 1   MATRIAARYVSRRL-SSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSS 59

Query: 195 GSVADAKLSDSVADAKPXXXXXXXXXXXXDKYRNYXXXXXXXXXXXXXXWYLKATAKKPE 374
           G        ++V DA P            DK+RNY              WYLK+++KKPE
Sbjct: 60  G--------ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPE 111


>gb|AFK47834.1| unknown [Medicago truncatula]
          Length = 120

 Score =  112 bits (280), Expect = 6e-23
 Identities = 69/122 (56%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
 Frame = +3

Query: 15  MATRNAARHVSRRLMSSG-GKVLGEEEKAAENVYIKKIEQEKMEKLARKGPKPEGQPTST 191
           MATR AAR  SRRL SSG GKVLGEEEKA EN Y KK EQEK+EKLARKGP+PE  P + 
Sbjct: 1   MATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPEATPAAG 60

Query: 192 S-GSVADAKLSDSVADAKPXXXXXXXXXXXXDKYRNYXXXXXXXXXXXXXXWYLKATAKK 368
           S GSV DAK S S                  DKYRNY              WYLK TAKK
Sbjct: 61  SGGSVTDAKPSAS------GHSDTSGPKVSSDKYRNYGVVAGTITIFAALGWYLKGTAKK 114

Query: 369 PE 374
           PE
Sbjct: 115 PE 116


>ref|NP_001143877.1| uncharacterized protein LOC100276678 [Zea mays]
           gi|195628674|gb|ACG36167.1| hypothetical protein [Zea
           mays] gi|413952218|gb|AFW84867.1| hypothetical protein
           ZEAMMB73_677361 [Zea mays]
          Length = 118

 Score =  108 bits (270), Expect = 8e-22
 Identities = 65/124 (52%), Positives = 73/124 (58%)
 Frame = +3

Query: 15  MATRNAARHVSRRLMSSGGKVLGEEEKAAENVYIKKIEQEKMEKLARKGPKPEGQPTSTS 194
           MATR AAR + RR +SSGGKVL EEEKAAENVYIKK+EQEK+EKLARKGP    QP+ST+
Sbjct: 1   MATRAAARFLQRRFLSSGGKVLSEEEKAAENVYIKKVEQEKLEKLARKGPSSGEQPSSTT 60

Query: 195 GSVADAKLSDSVADAKPXXXXXXXXXXXXDKYRNYXXXXXXXXXXXXXXWYLKATAKKPE 374
           GS A    SD  ADA P            DK +NY              WYL    KK E
Sbjct: 61  GSAA----SDVKADAGP--TESASASVSTDKNKNYAVLAGAVAALGGLGWYLLLKPKKSE 114

Query: 375 PVTE 386
            V +
Sbjct: 115 EVVD 118


>ref|XP_002312822.1| predicted protein [Populus trichocarpa] gi|222849230|gb|EEE86777.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score =  108 bits (269), Expect = 1e-21
 Identities = 64/124 (51%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
 Frame = +3

Query: 18  ATRNAARHVSRRLMSSGGKVLGEEEKAAENVYIKKIEQEKMEKLARKGPKPEGQPTSTSG 197
           A  +AAR V  R  SSGGKVLGEEEKAAENVYIKK+EQEK+EKLARKGPKPE    S SG
Sbjct: 4   AIGSAARRVVLRRFSSGGKVLGEEEKAAENVYIKKVEQEKLEKLARKGPKPEETTASGSG 63

Query: 198 SV-ADAKLSDSVADAKPXXXXXXXXXXXXDKYRNYXXXXXXXXXXXXXXWYLKATAKKPE 374
           +  AD K S + +   P            DKYRNY              WYLK+  KK E
Sbjct: 64  AAPADVKASTAASSTPP---GSSTEKVSTDKYRNYAVVAGTITALGALGWYLKSGGKKQE 120

Query: 375 PVTE 386
            V +
Sbjct: 121 EVRD 124


Top