BLASTX nr result

ID: Coptis21_contig00013754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013754
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor ...    72   1e-10
ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus comm...    71   4e-10
ref|XP_004137344.1| PREDICTED: probable ADP-ribosylation factor ...    68   2e-09
emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinife...    68   2e-09
ref|XP_003631121.1| Pollen-specific C2 domain containing protein...    67   4e-09

>ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 181

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -2

Query: 169 PNRLSEQINFFADFGLSVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQK 2
           PNR S         G S+ME+LLGLL++RV+RGINLAVRDVRSSDPY VIK+GKQK
Sbjct: 8   PNRTS---------GTSLMENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKMGKQK 54


>ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus communis]
           gi|223529983|gb|EEF31909.1| ARF GTPase activator,
           putative [Ricinus communis]
          Length = 183

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 32/40 (80%), Positives = 40/40 (100%)
 Frame = -2

Query: 121 SVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQK 2
           S+ME+LLGLL+IRV+RG+NLAVRDVRSSDPY+V+K+GKQK
Sbjct: 17  SLMENLLGLLRIRVKRGVNLAVRDVRSSDPYIVVKMGKQK 56


>ref|XP_004137344.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Cucumis sativus]
           gi|449497488|ref|XP_004160416.1| PREDICTED: probable
           ADP-ribosylation factor GTPase-activating protein
           AGD11-like [Cucumis sativus]
          Length = 181

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -2

Query: 124 LSVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQK 2
           L +ME+LLGLL+IR+ RG+NLAVRDVRSSDPYVV+K+GKQK
Sbjct: 15  LLLMENLLGLLRIRIVRGVNLAVRDVRSSDPYVVVKMGKQK 55


>emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinifera]
           gi|297734335|emb|CBI15582.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 37/38 (97%)
 Frame = -2

Query: 115 MEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQK 2
           ME+LLGLL++RV+RGINLAVRDVRSSDPY VIK+GKQK
Sbjct: 1   MENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKMGKQK 38


>ref|XP_003631121.1| Pollen-specific C2 domain containing protein [Medicago truncatula]
           gi|355525143|gb|AET05597.1| Pollen-specific C2 domain
           containing protein [Medicago truncatula]
          Length = 182

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 30/44 (68%), Positives = 39/44 (88%)
 Frame = -2

Query: 133 DFGLSVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQK 2
           D G S+ME LLGLL+IR++RG+NLAVRDV +SDPY V+K+GKQ+
Sbjct: 11  DSGKSLMEDLLGLLRIRIKRGVNLAVRDVNTSDPYAVVKMGKQR 54


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