BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013751
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   151   5e-35
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   151   5e-35
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   149   3e-34
ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t...   142   4e-32
emb|CAA16524.1| DNA topoisomerase like-protein [Arabidopsis thal...   142   4e-32

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/118 (65%), Positives = 90/118 (76%)
 Frame = -3

Query: 354  IDQIQVDVGGTGSFLGLRSTCSRVEFPGYQAVYKDKEAAALGSNEKEGDAREEAFEVLCK 175
            IDQIQVD+G     +  RSTCS VEF GYQAVYKD EA A+  +E EG+ R E F+ L  
Sbjct: 780  IDQIQVDIGNANESVVFRSTCSGVEFFGYQAVYKDVEAKAIRVDENEGNERGEVFKALSS 839

Query: 174  LKKGDSLQLGKVDLKEHSTQPPSRYSEGSLVKKLEELGIGRPSTYASTIKVLKDRNYV 1
            LK GD L L  ++L++H T PPSRYSEG+LVKKLEELGIGRPSTYA T+KVL+DRNYV
Sbjct: 840  LKAGDPLYLSLLELEQHHTLPPSRYSEGALVKKLEELGIGRPSTYAITMKVLQDRNYV 897


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/118 (65%), Positives = 90/118 (76%)
 Frame = -3

Query: 354  IDQIQVDVGGTGSFLGLRSTCSRVEFPGYQAVYKDKEAAALGSNEKEGDAREEAFEVLCK 175
            IDQIQVD+G     +  RSTCS VEF GYQAVYKD EA A+  +E EG+ R E F+ L  
Sbjct: 793  IDQIQVDIGNANESVVFRSTCSGVEFFGYQAVYKDVEAKAIRVDENEGNERGEVFKALSS 852

Query: 174  LKKGDSLQLGKVDLKEHSTQPPSRYSEGSLVKKLEELGIGRPSTYASTIKVLKDRNYV 1
            LK GD L L  ++L++H T PPSRYSEG+LVKKLEELGIGRPSTYA T+KVL+DRNYV
Sbjct: 853  LKAGDPLYLSLLELEQHHTLPPSRYSEGALVKKLEELGIGRPSTYAITMKVLQDRNYV 910


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223532629|gb|EEF34415.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/118 (63%), Positives = 88/118 (74%)
 Frame = -3

Query: 354  IDQIQVDVGGTGSFLGLRSTCSRVEFPGYQAVYKDKEAAALGSNEKEGDAREEAFEVLCK 175
            I+QIQVD+G     + LRS CS V F GYQ VY+DKEA A+ + E E +   EAF +L  
Sbjct: 685  IEQIQVDIGNANGSITLRSACSGVGFLGYQIVYEDKEAGAIKNKESEVNDHNEAFGILKS 744

Query: 174  LKKGDSLQLGKVDLKEHSTQPPSRYSEGSLVKKLEELGIGRPSTYASTIKVLKDRNYV 1
            LK GD   L +V LK+H TQPP RYSEG+LVKKLEELGIGRPSTYAST+KVL+DRNYV
Sbjct: 745  LKPGDPFNLSEVKLKQHFTQPPPRYSEGTLVKKLEELGIGRPSTYASTLKVLQDRNYV 802


>ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 1284

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/119 (60%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354  IDQIQVDVGGTGSFLGLRSTCSRVEFPGYQAVYKDKEAAALGSNEKEGDA-REEAFEVLC 178
            I QIQ+D+G     +  RS+CS+VEF GYQAVY+D EA A+ +N+ +  + REE F+ L 
Sbjct: 870  IAQIQLDIGNASESIIFRSSCSKVEFLGYQAVYEDPEAKAIKNNDNDQSSEREETFKTLS 929

Query: 177  KLKKGDSLQLGKVDLKEHSTQPPSRYSEGSLVKKLEELGIGRPSTYASTIKVLKDRNYV 1
             LK GD LQ+G+V+LK+H TQ P RYSEGSLVKKLEELGIGRPSTYAS  +VL+ R YV
Sbjct: 930  SLKDGDLLQIGEVELKQHHTQHPPRYSEGSLVKKLEELGIGRPSTYASIFRVLQHRKYV 988


>emb|CAA16524.1| DNA topoisomerase like-protein [Arabidopsis thaliana]
            gi|7270023|emb|CAB79839.1| DNA topoisomerase like-protein
            [Arabidopsis thaliana]
          Length = 1179

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/119 (60%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354  IDQIQVDVGGTGSFLGLRSTCSRVEFPGYQAVYKDKEAAALGSNEKEGDA-REEAFEVLC 178
            I QIQ+D+G     +  RS+CS+VEF GYQAVY+D EA A+ +N+ +  + REE F+ L 
Sbjct: 808  IAQIQLDIGNASESIIFRSSCSKVEFLGYQAVYEDPEAKAIKNNDNDQSSEREETFKTLS 867

Query: 177  KLKKGDSLQLGKVDLKEHSTQPPSRYSEGSLVKKLEELGIGRPSTYASTIKVLKDRNYV 1
             LK GD LQ+G+V+LK+H TQ P RYSEGSLVKKLEELGIGRPSTYAS  +VL+ R YV
Sbjct: 868  SLKDGDLLQIGEVELKQHHTQHPPRYSEGSLVKKLEELGIGRPSTYASIFRVLQHRKYV 926