BLASTX nr result

ID: Coptis21_contig00013750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013750
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [...   145   6e-33
ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248...   145   6e-33
emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]       138   1e-30
ref|XP_003550902.1| PREDICTED: transcription factor MYB39 [Glyci...   128   9e-28

>ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|222851189|gb|EEE88736.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  154 bits (389), Expect = 2e-35
 Identities = 93/211 (44%), Positives = 108/211 (51%), Gaps = 14/211 (6%)
 Frame = +3

Query: 3   PGRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXX 182
           PGRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ           
Sbjct: 112 PGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAATATNTSS 171

Query: 183 XXXXXXXXXXXQEYTTINPVLPAGRSXXXXXXXXXXXXXXXXHINSSLITPENSSTAASS 362
                       +++  N  +  G +                H+  S  TPENSSTAASS
Sbjct: 172 TSTATVSAPATNQHSISNRDVGTG-NLVMAPHGINGNDFGVSHVTQS-YTPENSSTAASS 229

Query: 363 D--------VSD-PKDYYTF----QDXXXXXXXSHINYPDFHTNQSGYFNQGSQGIEQQH 503
           D        VSD   DYY                 + Y +   +  G+FN G      +H
Sbjct: 230 DSFATQVSPVSDLTTDYYNIPVNRNTNPDYFQAGQVGYSESMISPPGFFNHGLDFQAMEH 289

Query: 504 EQNMW-FGSEDTMENSWNVEDLWFLQQQFCN 593
             N W   S DT +N WN+ED+WFLQQQ  N
Sbjct: 290 SSNQWPMDSGDTSDNMWNLEDIWFLQQQLNN 320


>gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [Vitis vinifera]
          Length = 306

 Score =  145 bits (367), Expect = 6e-33
 Identities = 90/211 (42%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
 Frame = +3

Query: 3   PGRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXX 182
           PGRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ           
Sbjct: 105 PGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATSGSSP 164

Query: 183 XXXXXXXXXXXQEYTTINPVLPAGRSXXXXXXXXXXXXXXXXHINSSLITPENSSTAASS 362
                       +    +  +P   +                   S+  TPENSSTAASS
Sbjct: 165 AAVAAHQFSGSCDIVAGSAAVPQMAAGGADFYGGQV---------STGYTPENSSTAASS 215

Query: 363 D--------VSDPKDYYTF----QDXXXXXXXSHINYPDFHTNQSGYFNQGSQGIEQQHE 506
           D        VSD  + Y F               + Y D   + SGYFNQG    +    
Sbjct: 216 DSFGAQVSPVSDLTEIYNFPVSDNQNPDFFQTDQVGYTDSLISPSGYFNQGLD-FQSMEP 274

Query: 507 QNMWF--GSEDTMENSWNVEDLWFLQQQFCN 593
              W+  G   T +N WNVED+W +Q QF N
Sbjct: 275 NTQWYEGGDTATADNLWNVEDIWSVQTQFTN 305


>ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248153 [Vitis vinifera]
           gi|296083206|emb|CBI22842.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  145 bits (367), Expect = 6e-33
 Identities = 90/211 (42%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
 Frame = +3

Query: 3   PGRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXX 182
           PGRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ           
Sbjct: 105 PGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATSGSSP 164

Query: 183 XXXXXXXXXXXQEYTTINPVLPAGRSXXXXXXXXXXXXXXXXHINSSLITPENSSTAASS 362
                       +    +  +P   +                   S+  TPENSSTAASS
Sbjct: 165 AAVAAHQFSGSCDIVAGSAAVPQMAAGGADFYGGQV---------STGYTPENSSTAASS 215

Query: 363 D--------VSDPKDYYTF----QDXXXXXXXSHINYPDFHTNQSGYFNQGSQGIEQQHE 506
           D        VSD  + Y F               + Y D   + SGYFNQG    +    
Sbjct: 216 DSFGAQVSPVSDLTEIYNFPVSDNQNPDFFQTGQVGYTDSLISPSGYFNQGLD-FQSMEP 274

Query: 507 QNMWF--GSEDTMENSWNVEDLWFLQQQFCN 593
              W+  G   T +N WNVED+W +Q QF N
Sbjct: 275 NTQWYEGGDTATADNLWNVEDIWSVQTQFTN 305


>emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]
          Length = 343

 Score =  138 bits (347), Expect = 1e-30
 Identities = 94/231 (40%), Positives = 106/231 (45%), Gaps = 34/231 (14%)
 Frame = +3

Query: 3   PGRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQ-XXXXXXXXXX 179
           PGRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ           
Sbjct: 112 PGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASASTATTG 171

Query: 180 XXXXXXXXXXXXQEYTTINPVLPAGRSXXXXXXXXXXXXXXXXHINSSLITPENSSTAAS 359
                         +   N                         +  S  TPENSSTAAS
Sbjct: 172 ASSSITTAAANTYHFNNNNNSFQTAAGAGHVALQQATLIGNNNDLAGSYTTPENSSTAAS 231

Query: 360 SD--------VSDPKDYYTFQDXXXXXXXS-------------HINYPDFHTNQSGY-FN 473
           SD        VS+  DYY+          S              + Y D  T+ SGY FN
Sbjct: 232 SDSFGTQVSPVSELTDYYSNMSVNNNKPSSQALDYFQATNPHHQVGYHDSMTSPSGYSFN 291

Query: 474 QG--------SQGIEQQHEQNMW-FGSEDTMENSWNVE--DLWFLQQQFCN 593
           QG        +    +Q+    W     D  +N WNVE  D+WFLQQQ  N
Sbjct: 292 QGGLNSHSFQAASAPEQNNNGQWGMDGGDFSDNLWNVEESDMWFLQQQLGN 342


>ref|XP_003550902.1| PREDICTED: transcription factor MYB39 [Glycine max]
          Length = 322

 Score =  128 bits (322), Expect = 9e-28
 Identities = 87/214 (40%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
 Frame = +3

Query: 3   PGRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXX 182
           PGRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ           
Sbjct: 106 PGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAATAPVTTTV 165

Query: 183 XXXXXXXXXXXQEYTTIN--PVLPAGRSXXXXXXXXXXXXXXXXHINSSLITPENSSTAA 356
                            N   VL                     H+  S  TPENSST A
Sbjct: 166 TAAATNNAFTYGNNLNNNKFEVLNHKGRMGLTDPSVANNDFVGSHVTQSYTTPENSSTGA 225

Query: 357 SSD---------VSDPKDYYTFQD---XXXXXXXSHI-NYPD-FHTNQSGYFNQGSQGIE 494
           SS          +SD  +YY+  +          S I NY D   T+ SG+       ++
Sbjct: 226 SSSDSFGTQVSTISDLTEYYSVPENTNSADYYQPSQISNYSDNCITSPSGFLFPQGLDLQ 285

Query: 495 QQHEQNMW-FGSEDTMENSWNVEDLWFLQQQFCN 593
                  W   S D+ +N W+VE + FL+QQ  N
Sbjct: 286 SMDPNTPWNMQSGDSSDNFWDVESMLFLEQQLMN 319


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