BLASTX nr result

ID: Coptis21_contig00013739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013739
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...    70   1e-10
emb|CBI17106.3| unnamed protein product [Vitis vinifera]               70   1e-10
gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]       67   1e-09
ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [S...    67   1e-09
ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...    67   1e-09

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
            vinifera]
          Length = 1038

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = -1

Query: 264  HLAAFRARYYIEGEVSDSGTGVSD--TRAQRAGTRSLPKIKDNVKDVMFYC 118
            HLAAFRARYYIEG+ SDSG+G  D  TR +    R LP +K+NVKDVMFYC
Sbjct: 988  HLAAFRARYYIEGDTSDSGSGSGDRSTRERNLEVRLLPAVKENVKDVMFYC 1038


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = -1

Query: 264  HLAAFRARYYIEGEVSDSGTGVSD--TRAQRAGTRSLPKIKDNVKDVMFYC 118
            HLAAFRARYYIEG+ SDSG+G  D  TR +    R LP +K+NVKDVMFYC
Sbjct: 982  HLAAFRARYYIEGDTSDSGSGSGDRSTRERNLEVRLLPAVKENVKDVMFYC 1032


>gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]
          Length = 941

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/54 (66%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = -1

Query: 264  HLAAFRARYYIEGEVSDSGT--GVSDTRAQRAG---TRSLPKIKDNVKDVMFYC 118
            HLAAFRARYY+EGE SD G+  G S     R G    R LPKIKDNVKDVMFYC
Sbjct: 888  HLAAFRARYYVEGESSDGGSTPGSSGQTVAREGPVEVRQLPKIKDNVKDVMFYC 941


>ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [Sorghum bicolor]
            gi|241917582|gb|EER90726.1| hypothetical protein
            SORBIDRAFT_01g004920 [Sorghum bicolor]
          Length = 1067

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/54 (66%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = -1

Query: 264  HLAAFRARYYIEGEVSDSGT--GVSDTRAQRAG---TRSLPKIKDNVKDVMFYC 118
            HLAAFRARYY+EGE SD G+  G S     R G    R LPKIKDNVKDVMFYC
Sbjct: 1014 HLAAFRARYYVEGESSDGGSTPGSSGQTVAREGPVEVRQLPKIKDNVKDVMFYC 1067


>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
           gi|222845420|gb|EEE82967.1| argonaute protein group
           [Populus trichocarpa]
          Length = 904

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/49 (69%), Positives = 39/49 (79%)
 Frame = -1

Query: 264 HLAAFRARYYIEGEVSDSGTGVSDTRAQRAGTRSLPKIKDNVKDVMFYC 118
           HLAAFRARYYIEGE SDSG+  +  R+  A  RSLP +K+NVKDVMFYC
Sbjct: 858 HLAAFRARYYIEGETSDSGSTGATGRSVEA--RSLPVVKENVKDVMFYC 904


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