BLASTX nr result
ID: Coptis21_contig00013736
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013736 (493 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis... 55 4e-12 ref|XP_003555232.1| PREDICTED: uncharacterized protein LOC100777... 59 5e-07 ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818... 59 5e-07 ref|XP_003535734.1| PREDICTED: putative transcription elongation... 59 5e-07 ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256... 58 9e-07 >ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis] gi|223525980|gb|EEF28368.1| suppressor of ty, putative [Ricinus communis] Length = 1547 Score = 55.1 bits (131), Expect(2) = 4e-12 Identities = 24/37 (64%), Positives = 32/37 (86%) Frame = +3 Query: 3 LKGHLCGVVAIYRSDITIKVDSQIKVLSVKCEHLSEV 113 LKG+LC V+AI SD+T+KVDS+ K+ +VKCEHLSE+ Sbjct: 618 LKGYLCRVLAIRYSDVTVKVDSKHKIFTVKCEHLSEI 654 Score = 40.8 bits (94), Expect(2) = 4e-12 Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 12/128 (9%) Frame = +2 Query: 143 DGFGTQGGKGDEPWAAKTSEKATDSCGNTTTFGGDPI*GKEGDDPWGSKASSKTATELGN 322 D GT+GG + W T T + G+ GG E +D W +K S+ + G Sbjct: 676 DLLGTEGGS--KGW---TDGAGTSADGDRWNAGGITA---ESEDGW-NKTSTNIESSGGT 726 Query: 323 GTGFGGEQQS-------WG--KQDCGDKMRKTAVNLDKGRSVAENNRSGWASGALI---Q 466 G+G S WG K D G+ A +K ++VAEN S W A Q Sbjct: 727 SGGWGKAADSSKDSGDGWGQAKLDPGNSTLDAAAAWNKEKNVAENPTSSWGDVATAKNQQ 786 Query: 467 DGWGSKGT 490 D W SK T Sbjct: 787 DSWTSKDT 794 >ref|XP_003555232.1| PREDICTED: uncharacterized protein LOC100777969 [Glycine max] Length = 967 Score = 58.5 bits (140), Expect = 5e-07 Identities = 25/37 (67%), Positives = 34/37 (91%) Frame = +3 Query: 3 LKGHLCGVVAIYRSDITIKVDSQIKVLSVKCEHLSEV 113 LKG++C V+A+ R+D+T+K+DSQ KVL+VKCEHLSEV Sbjct: 72 LKGYICRVIALRRADVTVKLDSQQKVLTVKCEHLSEV 108 >ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818587 [Glycine max] Length = 1495 Score = 58.5 bits (140), Expect = 5e-07 Identities = 25/37 (67%), Positives = 34/37 (91%) Frame = +3 Query: 3 LKGHLCGVVAIYRSDITIKVDSQIKVLSVKCEHLSEV 113 LKG++C V+A+ R+D+T+K+DSQ KVL+VKCEHLSEV Sbjct: 598 LKGYICRVIALRRADVTVKLDSQQKVLTVKCEHLSEV 634 >ref|XP_003535734.1| PREDICTED: putative transcription elongation factor SPT5 homolog 2-like [Glycine max] Length = 712 Score = 58.5 bits (140), Expect = 5e-07 Identities = 25/37 (67%), Positives = 34/37 (91%) Frame = +3 Query: 3 LKGHLCGVVAIYRSDITIKVDSQIKVLSVKCEHLSEV 113 LKG++C V+A+ R+D+T+K+DSQ KVL+VKCEHLSEV Sbjct: 597 LKGYICRVIALRRADVTVKLDSQQKVLTVKCEHLSEV 633 >ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera] Length = 2667 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/37 (72%), Positives = 33/37 (89%) Frame = +3 Query: 3 LKGHLCGVVAIYRSDITIKVDSQIKVLSVKCEHLSEV 113 LKG+LC V+AI SD+T+K+DSQ KVL+VKCEHLSEV Sbjct: 1611 LKGYLCRVLAIRYSDVTVKLDSQHKVLTVKCEHLSEV 1647