BLASTX nr result

ID: Coptis21_contig00013734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013734
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17036.3| unnamed protein product [Vitis vinifera]               40   1e-06
emb|CBI26086.3| unnamed protein product [Vitis vinifera]               41   2e-06
emb|CBI32233.3| unnamed protein product [Vitis vinifera]               40   2e-06
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    40   3e-06
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    42   5e-06

>emb|CBI17036.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487
           +QLKN WDY+++QY  W  +     HG + V    D+P +  +  + K+
Sbjct: 78  KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 126



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 160 VVEKSAPTPRIK-TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPY 336
           V+ ++    R K TD   +K F ++CL+E N    SG   KS +W RI +++ K     Y
Sbjct: 16  VMSQNVDISRAKWTDPIQRKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKCY 75

Query: 337 TQATQK 354
           T    K
Sbjct: 76  TSKQLK 81


>emb|CBI26086.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487
           +QLKN WDY++KQY TW  L   +  G + V    D P +  +  + K+
Sbjct: 82  KQLKNAWDYMKKQYLTWSRLITMMGDGYNSVTKTFDLPTERWEEYLQKY 130



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 196 TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354
           +D   +K F ++CL E N+   SG + K  SW RI K++ K     + Q   K
Sbjct: 33  SDPTQRKHFIDLCLHEANSGFRSGGTLKPSSWPRIIKELEKLVGKRFNQKQLK 85


>emb|CBI32233.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 40.0 bits (92), Expect(2) = 2e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487
           +QLKN WDY+++QY  W  +     HG + V    D+P +  +  + K+
Sbjct: 62  KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 110



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 196 TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354
           TD   +K F ++CL+E N    SG   K  +W RI +K+ K     YT    K
Sbjct: 13  TDPIQRKHFIDLCLQEANKGFRSGGGLKFSAWPRIAEKLEKLLRKRYTSKQLK 65


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487
           +QLKN WDY+++QY  W  +     HG + V    D+P +  +  + K+
Sbjct: 62  KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 110



 Score = 35.8 bits (81), Expect(2) = 3e-06
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 211 KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354
           +K F ++CL+E N    SG   KS +W RI +++ K     YT    K
Sbjct: 18  RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKRYTSKQLK 65


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +2

Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487
           +QLKN+WDY+++QY  W  +     HG + V    D+P +  +  + K+
Sbjct: 90  KQLKNEWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 138



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 196 TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354
           TD   +K F ++CL+E N    S    KS +W RI +++ K     +T    K
Sbjct: 41  TDPIQRKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLK 93


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