BLASTX nr result
ID: Coptis21_contig00013734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013734 (498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17036.3| unnamed protein product [Vitis vinifera] 40 1e-06 emb|CBI26086.3| unnamed protein product [Vitis vinifera] 41 2e-06 emb|CBI32233.3| unnamed protein product [Vitis vinifera] 40 2e-06 emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera] 40 3e-06 ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin... 42 5e-06 >emb|CBI17036.3| unnamed protein product [Vitis vinifera] Length = 157 Score = 40.0 bits (92), Expect(2) = 1e-06 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +2 Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487 +QLKN WDY+++QY W + HG + V D+P + + + K+ Sbjct: 78 KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 126 Score = 37.4 bits (85), Expect(2) = 1e-06 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +1 Query: 160 VVEKSAPTPRIK-TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPY 336 V+ ++ R K TD +K F ++CL+E N SG KS +W RI +++ K Y Sbjct: 16 VMSQNVDISRAKWTDPIQRKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKCY 75 Query: 337 TQATQK 354 T K Sbjct: 76 TSKQLK 81 >emb|CBI26086.3| unnamed protein product [Vitis vinifera] Length = 228 Score = 41.2 bits (95), Expect(2) = 2e-06 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +2 Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487 +QLKN WDY++KQY TW L + G + V D P + + + K+ Sbjct: 82 KQLKNAWDYMKKQYLTWSRLITMMGDGYNSVTKTFDLPTERWEEYLQKY 130 Score = 35.0 bits (79), Expect(2) = 2e-06 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +1 Query: 196 TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354 +D +K F ++CL E N+ SG + K SW RI K++ K + Q K Sbjct: 33 SDPTQRKHFIDLCLHEANSGFRSGGTLKPSSWPRIIKELEKLVGKRFNQKQLK 85 >emb|CBI32233.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 40.0 bits (92), Expect(2) = 2e-06 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +2 Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487 +QLKN WDY+++QY W + HG + V D+P + + + K+ Sbjct: 62 KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 110 Score = 36.2 bits (82), Expect(2) = 2e-06 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +1 Query: 196 TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354 TD +K F ++CL+E N SG K +W RI +K+ K YT K Sbjct: 13 TDPIQRKHFIDLCLQEANKGFRSGGGLKFSAWPRIAEKLEKLLRKRYTSKQLK 65 >emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera] Length = 596 Score = 40.0 bits (92), Expect(2) = 3e-06 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +2 Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487 +QLKN WDY+++QY W + HG + V D+P + + + K+ Sbjct: 62 KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 110 Score = 35.8 bits (81), Expect(2) = 3e-06 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 Query: 211 KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354 +K F ++CL+E N SG KS +W RI +++ K YT K Sbjct: 18 RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKRYTSKQLK 65 >ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed protein product [Vitis vinifera] Length = 299 Score = 41.6 bits (96), Expect(2) = 5e-06 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +2 Query: 341 RQLKNQWDYLRKQYQTWRVLSNRIEHGVDFVRGVLDFPDDIIKVEINKF 487 +QLKN+WDY+++QY W + HG + V D+P + + + K+ Sbjct: 90 KQLKNEWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKY 138 Score = 33.5 bits (75), Expect(2) = 5e-06 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 196 TDNA*KKCFTEMCLEEVNNYGYSGTSFKSESWTRINKKMSKAYDVPYTQATQK 354 TD +K F ++CL+E N S KS +W RI +++ K +T K Sbjct: 41 TDPIQRKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLK 93