BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013719
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]    59   5e-07
ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...    58   1e-06
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    57   2e-06

>emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]
          Length = 986

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
 Frame = -2

Query: 422 LAIFKCGYVTWTDFAIKDHKASFDDLIHYKGQFIVVDSTGQTFVMDPYTLSSTTLANRVV 243
           LA+++ G   W+       K+ FDD+I+YKG+F  +D  G+  V+D  +L +T LA+ V 
Sbjct: 588 LALWRLGEKKWSLIDDGAEKSHFDDVIYYKGRFYAIDYXGRIVVIDADSLKATELASPV- 646

Query: 242 NLYEEEQMKEFGETNCVPIIYVDSHRHLIISNKQLFLVDIYVEEHGPNWPCDSHGQCT-- 69
                      G           +HRH + S  +LFLVD YV        C+++      
Sbjct: 647 ----------HGSRG--------NHRHFVESFGELFLVDKYVVTF-----CNNYSDIVSV 683

Query: 68  ----PIDCKVFVLDEEQQQW 21
               P+  +VF   EE+Q+W
Sbjct: 684 VPDYPVHXEVFKFIEEEQKW 703


>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
 Frame = -2

Query: 422 LAIFKCGYVTWTDFAIKDHKASFDDLIHYKGQFIVVDSTGQTFVMDPYTLSSTTLANRVV 243
           LA+++ G   W+       K+ FDD+I+YKG+F  +D  G+  V+D  +L +T LA+ V 
Sbjct: 198 LALWRLGEEKWSLIDDGAEKSHFDDVIYYKGRFYAIDYKGRIVVIDADSLKATELASPV- 256

Query: 242 NLYEEEQMKEFGETNCVPIIYVDSHRHLIISNKQLFLVDIYVEEHGPNWPCDSHGQCT-- 69
                      G           +H+H + S  +LFLVD Y+++    + C+ +      
Sbjct: 257 ----------HGSRG--------THKHFVESFGELFLVDKYLDDELQIF-CNDYSDIVAD 297

Query: 68  ----PIDCKVFVLDEEQQQW 21
               P+  +VF   EE+Q+W
Sbjct: 298 VPDYPVHFEVFKFIEEEQKW 317


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
 Frame = -2

Query: 422 LAIFKCGYVTWTDFAIKDHKASFDDLIHYKGQFIVVDSTGQTFVMDPYTLSSTTLANRVV 243
           LA+F+ G   W    I D ++ +DD+I + G+F  VD+TG+T V+D    SS      VV
Sbjct: 181 LAMFRSGDKKW--MIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSP-----VV 233

Query: 242 NLYEEEQMKEFGETNCVPIIYVDSHRHLIISNKQLFLVDIYVEEHGPNWPCDSHGQC--- 72
           NL                 ++    + L+ S  +L LVD Y   +  +   D H +    
Sbjct: 234 NL-------------AASSVFGGDKKVLVESEGELLLVDTYFTMYHDD---DEHVRWMIE 277

Query: 71  TPIDCKVFVLDEEQQQWVPVESL 3
             I  KVF LD+ +Q+WV +ESL
Sbjct: 278 RMIHFKVFRLDQREQKWVEIESL 300