BLASTX nr result

ID: Coptis21_contig00013717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013717
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36731.1| unknown [Lotus japonicus]                              179   5e-43
ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|2...   179   5e-43
ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|2...   178   1e-42
gb|ABK95860.1| unknown [Populus trichocarpa]                          174   2e-41
ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein...   168   1e-39

>gb|AFK36731.1| unknown [Lotus japonicus]
          Length = 178

 Score =  179 bits (455), Expect = 5e-43
 Identities = 89/149 (59%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
 Frame = -1

Query: 686 QVQMASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--L 513
           +VQMAS     L P LL HGRK+H  +    PVS     +  + LV KA+GESS+SS  L
Sbjct: 31  KVQMASIAAS-LQPPLLLHGRKSHTGNFPSFPVSLLPGRRNLIALVVKASGESSESSTSL 89

Query: 512 DIVKSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWW 333
            +++SVQN+WDK EDR+ L+G GF G+VALWAS NL++++D++PVLP+ LELIGILFS W
Sbjct: 90  TVLQSVQNVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVW 149

Query: 332 FIYRYLLFKPDREEFYEIVKKSVSDILGQ 246
           F YRYLLFKPDREE ++I+ KSVSDILGQ
Sbjct: 150 FTYRYLLFKPDREELFQILNKSVSDILGQ 178


>ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|222840724|gb|EEE78271.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  179 bits (455), Expect = 5e-43
 Identities = 90/146 (61%), Positives = 116/146 (79%), Gaps = 2/146 (1%)
 Frame = -1

Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504
           MAS T  + SP LL HG++   ++L  LP+S  K+ +  V++V +ATGESS+SS  L IV
Sbjct: 1   MASITASLPSPPLLVHGKRTLSSTLQTLPLSPIKDRQNCVSVVVRATGESSESSAPLGIV 60

Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324
           KSV+NIWD SEDR+ALVGLGF  +VA+W S  L+ +IDK+PV+PS LELIGILFS WFIY
Sbjct: 61  KSVKNIWDDSEDRLALVGLGFAALVAIWTSAKLILAIDKLPVVPSVLELIGILFSSWFIY 120

Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246
           RYLLFKP+REE ++I+KKSV++ILGQ
Sbjct: 121 RYLLFKPNREELFQIIKKSVANILGQ 146


>ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|222845483|gb|EEE83030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  178 bits (451), Expect = 1e-42
 Identities = 87/146 (59%), Positives = 114/146 (78%), Gaps = 2/146 (1%)
 Frame = -1

Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504
           MAS    + SP LL HG++    +L +LP+S+ KE +  V +V KATGESS+SS  L IV
Sbjct: 1   MASIYANLPSPPLLVHGKRIPFRTLQKLPLSTIKERQNCVAVVVKATGESSESSTSLSIV 60

Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324
           KSVQNIWD SEDR+ LVGLGF  +VA+WAS N+++++DK+PV+PS LE +GIL+S WF+Y
Sbjct: 61  KSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVY 120

Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246
           RYLL KP+REE ++I+KKSV DILGQ
Sbjct: 121 RYLLLKPNREELFQIIKKSVGDILGQ 146


>gb|ABK95860.1| unknown [Populus trichocarpa]
          Length = 146

 Score =  174 bits (441), Expect = 2e-41
 Identities = 85/146 (58%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
 Frame = -1

Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504
           MAS    + SP LL H ++    +L +LP+S+ KE +  V +  KATGESS+SS  L IV
Sbjct: 1   MASIYANLPSPPLLVHSKRIPFRTLQKLPLSTIKERQNCVAVAVKATGESSESSTSLSIV 60

Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324
           KSVQNIWD SEDR+ LVGLGF  +VA+WAS N+++++DK+PV+PS LE +GIL+S WF+Y
Sbjct: 61  KSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVY 120

Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246
           RYLL KP+REE ++I+KKSV DILGQ
Sbjct: 121 RYLLLKPNREELFQIIKKSVGDILGQ 146


>ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|225442617|ref|XP_002284537.1| PREDICTED: thylakoid
           membrane phosphoprotein 14 kDa, chloroplastic isoform 1
           [Vitis vinifera] gi|297743263|emb|CBI36130.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  168 bits (426), Expect = 1e-39
 Identities = 83/146 (56%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
 Frame = -1

Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504
           MA + +  L P LL H R+A   +L   PVS  +  +  +++VAKATGESS+SS  L IV
Sbjct: 1   MAYSVLASLPPPLLVHRREALVRALNGFPVSINRGRQSSLSVVAKATGESSESSTTLSIV 60

Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324
           KSVQN+W   EDR AL GLGF  +VA+WAS NL+++ID +P++P   E IGIL+SWWFIY
Sbjct: 61  KSVQNVWGDPEDRFALFGLGFAAIVAVWASANLITAIDNLPLIPGVFEFIGILYSWWFIY 120

Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246
           RYLLFKP+REE +EI+ KSVS++LGQ
Sbjct: 121 RYLLFKPNREELFEIINKSVSEVLGQ 146


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