BLASTX nr result
ID: Coptis21_contig00013717
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013717 (779 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36731.1| unknown [Lotus japonicus] 179 5e-43 ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|2... 179 5e-43 ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|2... 178 1e-42 gb|ABK95860.1| unknown [Populus trichocarpa] 174 2e-41 ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein... 168 1e-39 >gb|AFK36731.1| unknown [Lotus japonicus] Length = 178 Score = 179 bits (455), Expect = 5e-43 Identities = 89/149 (59%), Positives = 113/149 (75%), Gaps = 2/149 (1%) Frame = -1 Query: 686 QVQMASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--L 513 +VQMAS L P LL HGRK+H + PVS + + LV KA+GESS+SS L Sbjct: 31 KVQMASIAAS-LQPPLLLHGRKSHTGNFPSFPVSLLPGRRNLIALVVKASGESSESSTSL 89 Query: 512 DIVKSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWW 333 +++SVQN+WDK EDR+ L+G GF G+VALWAS NL++++D++PVLP+ LELIGILFS W Sbjct: 90 TVLQSVQNVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVW 149 Query: 332 FIYRYLLFKPDREEFYEIVKKSVSDILGQ 246 F YRYLLFKPDREE ++I+ KSVSDILGQ Sbjct: 150 FTYRYLLFKPDREELFQILNKSVSDILGQ 178 >ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|222840724|gb|EEE78271.1| predicted protein [Populus trichocarpa] Length = 146 Score = 179 bits (455), Expect = 5e-43 Identities = 90/146 (61%), Positives = 116/146 (79%), Gaps = 2/146 (1%) Frame = -1 Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504 MAS T + SP LL HG++ ++L LP+S K+ + V++V +ATGESS+SS L IV Sbjct: 1 MASITASLPSPPLLVHGKRTLSSTLQTLPLSPIKDRQNCVSVVVRATGESSESSAPLGIV 60 Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324 KSV+NIWD SEDR+ALVGLGF +VA+W S L+ +IDK+PV+PS LELIGILFS WFIY Sbjct: 61 KSVKNIWDDSEDRLALVGLGFAALVAIWTSAKLILAIDKLPVVPSVLELIGILFSSWFIY 120 Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246 RYLLFKP+REE ++I+KKSV++ILGQ Sbjct: 121 RYLLFKPNREELFQIIKKSVANILGQ 146 >ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|222845483|gb|EEE83030.1| predicted protein [Populus trichocarpa] Length = 146 Score = 178 bits (451), Expect = 1e-42 Identities = 87/146 (59%), Positives = 114/146 (78%), Gaps = 2/146 (1%) Frame = -1 Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504 MAS + SP LL HG++ +L +LP+S+ KE + V +V KATGESS+SS L IV Sbjct: 1 MASIYANLPSPPLLVHGKRIPFRTLQKLPLSTIKERQNCVAVVVKATGESSESSTSLSIV 60 Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324 KSVQNIWD SEDR+ LVGLGF +VA+WAS N+++++DK+PV+PS LE +GIL+S WF+Y Sbjct: 61 KSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVY 120 Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246 RYLL KP+REE ++I+KKSV DILGQ Sbjct: 121 RYLLLKPNREELFQIIKKSVGDILGQ 146 >gb|ABK95860.1| unknown [Populus trichocarpa] Length = 146 Score = 174 bits (441), Expect = 2e-41 Identities = 85/146 (58%), Positives = 112/146 (76%), Gaps = 2/146 (1%) Frame = -1 Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504 MAS + SP LL H ++ +L +LP+S+ KE + V + KATGESS+SS L IV Sbjct: 1 MASIYANLPSPPLLVHSKRIPFRTLQKLPLSTIKERQNCVAVAVKATGESSESSTSLSIV 60 Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324 KSVQNIWD SEDR+ LVGLGF +VA+WAS N+++++DK+PV+PS LE +GIL+S WF+Y Sbjct: 61 KSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVY 120 Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246 RYLL KP+REE ++I+KKSV DILGQ Sbjct: 121 RYLLLKPNREELFQIIKKSVGDILGQ 146 >ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic isoform 2 [Vitis vinifera] gi|225442617|ref|XP_002284537.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic isoform 1 [Vitis vinifera] gi|297743263|emb|CBI36130.3| unnamed protein product [Vitis vinifera] Length = 146 Score = 168 bits (426), Expect = 1e-39 Identities = 83/146 (56%), Positives = 108/146 (73%), Gaps = 2/146 (1%) Frame = -1 Query: 677 MASTTIGILSPSLLFHGRKAHCTSLYRLPVSSFKESKRRVTLVAKATGESSDSS--LDIV 504 MA + + L P LL H R+A +L PVS + + +++VAKATGESS+SS L IV Sbjct: 1 MAYSVLASLPPPLLVHRREALVRALNGFPVSINRGRQSSLSVVAKATGESSESSTTLSIV 60 Query: 503 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLVSSIDKIPVLPSFLELIGILFSWWFIY 324 KSVQN+W EDR AL GLGF +VA+WAS NL+++ID +P++P E IGIL+SWWFIY Sbjct: 61 KSVQNVWGDPEDRFALFGLGFAAIVAVWASANLITAIDNLPLIPGVFEFIGILYSWWFIY 120 Query: 323 RYLLFKPDREEFYEIVKKSVSDILGQ 246 RYLLFKP+REE +EI+ KSVS++LGQ Sbjct: 121 RYLLFKPNREELFEIINKSVSEVLGQ 146