BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013716
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    84   4e-14
ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|35548...    84   4e-14
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    83   6e-14
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    81   2e-13
ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162...    80   3e-13

>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
 Frame = +1

Query: 13  YGYSPKVIGSCNGIVCIVN-GRHVCLLNPYTREYKIVTF-------ENEFNFYSDVICGF 168
           Y  S  ++GSCNG++CI N    +   NP  R+++I+ +         +   ++  +CGF
Sbjct: 87  YSNSITLLGSCNGLLCISNVADDIAFWNPSLRQHRILPYLPVPRRRHPDTTLFAARVCGF 146

Query: 169 GYAPTYEDYKLVRMEN--DYGD--YASVVSVYSVNDALCTPTISTIPFRVDSRKEAGIFL 336
           G+     DYKLVR+    D  D  + S V +Y++  A    T+ ++P+ +   +  G+F+
Sbjct: 147 GFDHKTRDYKLVRISYFVDLHDRSFDSQVKLYTLR-ANAWKTLPSLPYALCCARTMGVFV 205

Query: 337 NGALHWIAMS--EDNYYYTVISFKLEETICFEFSIP------AGVHEYSALMNXXXXXXX 492
             +LHW+     E +    +I+F L   I  E  +P       G     AL+        
Sbjct: 206 GNSLHWVVTRKLEPDQPDLIIAFDLTHDIFRELPLPDTGGVDGGFEIDLALLGGSLCMTV 265

Query: 493 XXXXXRPGLSFDKDIQVWVMKTYGRTDSWVKLFSMERT 606
                R        I VWVM+ Y R DSW K+F++E +
Sbjct: 266 NFHKTR--------IDVWVMREYNRRDSWCKVFTLEES 295


>ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|355483283|gb|AES64486.1|
           F-box protein [Medicago truncatula]
          Length = 325

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 29/249 (11%)
 Frame = +1

Query: 31  VIGSCNGIVCIVNG----RH------VCLLNPYTREYKIVTFE--------NEFNFYSDV 156
           +IGSCNG++ I NG    RH      + + NP T +++I+ F            N  S  
Sbjct: 3   LIGSCNGLIAISNGQTAFRHPDDANEITIWNPNTGKHRIIPFLPLPIPNILKSDNIDSVA 62

Query: 157 IC-----GFGYAPTYEDYKLVRME---NDYGDYASVVSVYSVNDALCTPTISTIPFRVDS 312
           +C     GFG+ P   DYKL+R+    + +  + S V ++S+        I ++P+ +  
Sbjct: 63  LCAVFVHGFGFDPLSGDYKLLRISWLADIHYSFESHVRLFSLKTN-SWKIIPSMPYALKY 121

Query: 313 RKEAGIFLNGALHWIAMSE--DNYYYTVISFKLEETICFEFSIPAGVHEYSALMNXXXXX 486
            +  GIF+  +LHW+   E  +++   +++F L   I     +P  V+  S  +N     
Sbjct: 122 VQAMGIFVENSLHWVMTREIDESHPCLIVAFNLTLDIFNVVPLPEEVNSESFEINVVVLE 181

Query: 487 XXXXXXXRPGLSF-DKDIQVWVMKTYGRTDSWVKLFSMERTVMSPLSDPEVYPEEFEFEL 663
                     L++ + + +VWVMK YG TDSW KLF    T+M P          F  +L
Sbjct: 182 GCLCMT----LNYRNTEFEVWVMKEYGSTDSWCKLF----TLMEPC---------FLVDL 224

Query: 664 PNLRPLCFS 690
              RPLC+S
Sbjct: 225 EIFRPLCYS 233


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)
 Frame = +1

Query: 13  YGYSPKVIGSCNGIVCIVN-GRHVCLLNPYTREYKIVTFE-------NEFNFYSDVIC-- 162
           Y    KV+GSCNG++CI N    +   NP  R+++I+  E       NE N  + ++   
Sbjct: 82  YSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNENNTITTLLAAH 141

Query: 163 --GFGYAPTYEDYKLVRM----ENDYGDYASVVSVYSVNDALCTPTISTIPFRVDSRKEA 324
             GFGY    +DYKLV +    +     + S V +Y++   +   T+ ++P+ +   +  
Sbjct: 142 VYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWK-TLPSMPYALCCARTM 200

Query: 325 GIFLNGALHWIAMS--EDNYYYTVISFKLEETICFEFSIPAGVHEYSALMNXXXXXXXXX 498
           G+F++GALHW+     E      +++F L   +  E ++P  V     +           
Sbjct: 201 GVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKFDMDVALLRGMLCI 260

Query: 499 XXXRPGLSFDKDIQVWVMKTYGRTDSWVKLFSMERTVMSPLSDPEVYPEEFEFELPNLRP 678
              R    FD    VWVM+ YG  DSW K+F++ +            P + +  + +L+P
Sbjct: 261 IENRGSDGFD----VWVMREYGSHDSWCKMFTVGQ------------PRDVKL-MKSLKP 303

Query: 679 LCFSMN 696
           L +S N
Sbjct: 304 LGYSRN 309


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
 Frame = +1

Query: 13  YGYSPKVIGSCNGIVCIVN-GRHVCLLNPYTREYKIVTFEN----EFNFYSDVICGFGYA 177
           Y  S KV+GS NG++CI N    + L NP+ R+++I+  +     E + ++  + GFG+ 
Sbjct: 83  YSNSIKVLGSSNGLLCISNVADDIALWNPFLRKHRILPSDRFHRPESSLFAARVYGFGHH 142

Query: 178 PTYEDYKLVRM----ENDYGDYASVVSVYSVNDALCTPTISTIPFRVDSRKEAGIFLNGA 345
           P   DYKL+ +    +     + S V +Y++        + ++P+ +   +  G+F++G+
Sbjct: 143 PPSNDYKLLSITYFVDLHKRTFDSQVQLYTLKSD-SWKNLPSMPYALCCARTMGVFVSGS 201

Query: 346 LHWIAMS--EDNYYYTVISFKL-EETICFEFSIPAGVHEYSALMNXXXXXXXXXXXXRPG 516
           LHW+     + +    +++F L  ET C E  +PA V+    +              R G
Sbjct: 202 LHWLVTRKLQPDEPDLIVAFDLTSETFC-EVPLPATVNGNFDMQVALLGGCLCVVEHR-G 259

Query: 517 LSFDKDIQVWVMKTYGRTDSWVKLFSM 597
             F     VWVM+ YG  DSW KLFS+
Sbjct: 260 TGF----HVWVMRVYGSRDSWEKLFSL 282


>ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162697|gb|ABD28492.1|
           Cyclin-like F-box; F-box protein interaction domain;
           Galactose oxidase, central [Medicago truncatula]
           gi|355483236|gb|AES64439.1| F-box protein [Medicago
           truncatula]
          Length = 424

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 33/253 (13%)
 Frame = +1

Query: 31  VIGSCNGIVCIVNGRHV----------CLLNPYTREYKIVTF--------ENEFNFYSDV 156
           +IGSCNG++ + +G  V           + NP TR+ + + F        E+  N     
Sbjct: 104 LIGSCNGLLALSDGEIVFKHPHGVLETTIWNPNTRKDRTIPFIPLPIPNIEDSDNPNRGG 163

Query: 157 IC--GFGYAPTYEDYKLVRM------ENDYGDYASVVSVYSVNDALCTPTISTIPFRVDS 312
           IC  GFG+ P   DYKL+R+      +N +  Y S VS++S+       TI ++P+ +  
Sbjct: 164 ICVHGFGFDPFTADYKLLRITWLFARQNIF--YDSHVSLFSLKTN-SWKTIPSMPYALQY 220

Query: 313 RKEAGIFLNGALHWIAMS--EDNYYYTVISFKLEETICFEFSIPAGVH--EYSALMNXXX 480
            +  G+F+  +LHW+     + +Y + +++F L   I  E  +P  +   E ++  N   
Sbjct: 221 VQAMGVFVQNSLHWVMAKKLDGSYPWLIVAFNLTLEIFNEVPLPVELEGEEVNSNSNGSF 280

Query: 481 XXXXXXXXXRPGLSFDKD---IQVWVMKTYGRTDSWVKLFSMERTVMSPLSDPEVYPEEF 651
                       +S + +   I VWVMK YG  DSW KLF++ ++              F
Sbjct: 281 KIRVAVLGGCLCMSVNYEATKIDVWVMKDYGSRDSWCKLFTLVKSC-------------F 327

Query: 652 EFELPNLRPLCFS 690
              L  LRPLC+S
Sbjct: 328 NSPLDFLRPLCYS 340