BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013693
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                   119   2e-24
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...   111   4e-22
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...   105   3e-20
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...   101   5e-19
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   4e-13

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score =  119 bits (297), Expect = 2e-24
 Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 9/299 (3%)
 Frame = -2

Query: 1288 WKLIQNCAATDSLAQKKGVHLAS-SCRFCKSEVESLQHILWECSFSRVLWQWTTSRFQTS 1112
            W+ + N   TD   +K+G ++ S  C FC+ + E+  HI  +C  +  LW W        
Sbjct: 89   WRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQH 148

Query: 1111 LTFDNFNEAIKVARLWSPRLKHLWHSAVASTLVSLWKLRNSIHFEGKPRDINKCKASVKY 932
            L   +F+  + ++R+    ++H+ +SA+   + S+W   N+ +F+G  + ++    ++  
Sbjct: 149  L---DFSSILNISRM----VQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILA 201

Query: 931  QVSTTAYLSKAFSFNNERDKF-VGAAWNVSLRPYPAPNIIQGIWLPPESGTVKINTDXXX 755
            +V   +++       +    F +   +++  +        + IW+PP  G +KIN D   
Sbjct: 202  EVLRLSFMLDIVKGASSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSV 261

Query: 754  XXXXXXXXXGVSYRDHEGQFKLTYWRSIG----VDNNYRAECLAILEGVELSITRGWLLV 587
                     GV +R  +  F   + ++IG    ++  Y A   AI +  EL +T     +
Sbjct: 262  VGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTN----I 317

Query: 586  WVESDSAAAVRAFGSNF-LPWDIRPRWENCLGQLQHFK--ITHIWREGNTTADALSKAG 419
            W+E+DS   +RAF  N  +PW +  RW NCL   +  +   TH+ REGN  ADAL+K G
Sbjct: 318  WIETDSVNVIRAFHFNTGVPWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALAKNG 376


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score =  111 bits (278), Expect = 4e-22
 Identities = 86/301 (28%), Positives = 126/301 (41%), Gaps = 6/301 (1%)
 Frame = -2

Query: 1288 WKLIQNCAATDSLAQKKGVHLASSCRFCKSEVESLQHILWECSFSRVLWQWTTSRFQTSL 1109
            W+L+ N   TD   +K+G  + S C FC    ES QHI +EC  +  LW W      T  
Sbjct: 54   WRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGK--GTDK 111

Query: 1108 TFDNFNEAIKVARLW---SPRLKHLWHSAVASTLVSLWKLRNSIHFEGKPRDINKCKASV 938
              D  +    + R W   S  + ++ +SA+  T+ S+W  RN   F  K + +      +
Sbjct: 112  LLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNII 171

Query: 937  KYQVSTTAYLSKAFSFNNERDKFVGAAWNVSLRPYPAPNIIQGIWLPPESGTVKINTDXX 758
              +V  +  L      +  +D  V   +N+  +       +  IW PP    VKIN D  
Sbjct: 172  LAEVKMSFSLCMIKGNSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGS 231

Query: 757  XXXXXXXXXXGVSYRDHEGQFKLTYWRSIGVDNNYRAECLAILEGVELSITRGWLLVWVE 578
                      G+  RD    F      +IG      AE  A +  +E +     + V +E
Sbjct: 232  SVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLE 291

Query: 577  SDSAAAVRAFGSNF-LPWDIRPRWENCLGQLQHFKIT--HIWREGNTTADALSKAGVDFQ 407
            +DS   V AF     +PW +R RW+NC         +  HI REGN  ADAL+K G    
Sbjct: 292  TDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGLS 351

Query: 406  L 404
            L
Sbjct: 352  L 352


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
            gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
            dehydrogenase [Medicago truncatula]
          Length = 866

 Score =  105 bits (261), Expect = 3e-20
 Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 4/291 (1%)
 Frame = -2

Query: 1288 WKLIQNCAATDSLAQKKGVHLASSCRFCKSEVESLQHILWECSFSRVLWQWTTSRFQTSL 1109
            W+L+ +    D   +++G  +   C  C +  ES  H+ +ECS++  LW W  S    SL
Sbjct: 61   WRLMNDKIPVDEKLKERGHVIPFICSLCMTAEESSFHLFFECSYAVHLWCWLASILNQSL 120

Query: 1108 TFDNFNEAIKV-ARLWSPRLKHLWHSAVASTLVSLWKLRNSIHFEGKPRDINKCKASVKY 932
             F    E   + AR WSP+      S V + L ++W  RN+  F+ +        + +  
Sbjct: 121  HFLALEEIWSLSARGWSPQFTLAITSTVINILSAIWNARNTYRFKNRKIHWESVISQIIV 180

Query: 931  QVSTTAYLSKAFSFNNERDKFVGAAWNVSLRPYPAPNIIQGIWLPPESGTVKINTDXXXX 752
             VS +A  SK  + +  R+  +  A+NVS+ P     + + I  PP SG +K N D    
Sbjct: 181  NVSLSASNSKLSASSGIREFSILKAFNVSIHPLKLLIVKEVISSPPISGWIKGNCD--GA 238

Query: 751  XXXXXXXXGVSYRDHEGQFKLTYWRSIGVDNNYRAECLAILEGVELSITRGWLLVWVESD 572
                    G  +R+ +GQF   +  + G++N                          E+D
Sbjct: 239  FAAGKAACGAIFRNSKGQFMGCF--AEGLNN--------------------------ETD 270

Query: 571  SAAAVRAFGS-NFLPWDIRPRWENCLG--QLQHFKITHIWREGNTTADALS 428
                V+AF S +  PW +  RW NCL      +F ++HI+REGN  ADAL+
Sbjct: 271  FMLVVQAFKSQDIFPWQLTNRWSNCLNITSSMNFIVSHIFREGNACADALA 321


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
            gi|355506707|gb|AES87849.1| GDSL esterase/lipase
            [Medicago truncatula]
          Length = 1004

 Score =  101 bits (251), Expect = 5e-19
 Identities = 81/297 (27%), Positives = 118/297 (39%), Gaps = 3/297 (1%)
 Frame = -2

Query: 1288 WKLIQNCAATDSLAQKKGVHLASSCRFCKSEVESLQHILWECSFSRVLWQWTTSRFQTSL 1109
            W+LI +   TD   Q++G  L S C  C + VE+  H+ +EC F+  +W           
Sbjct: 130  WRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIW----------- 178

Query: 1108 TFDNFNEAIKVARLWSPRLKHLWHSAVASTLVSLWKLRNSIHFEGKPRDINKCKASVKYQ 929
                                  W ++V         L +S+HF+  P   + C      Q
Sbjct: 179  ---------------------CWFASV---------LDSSLHFQSIPDIWSVCDRGWSPQ 208

Query: 928  VSTTAYLSKAFSFNNERDKFVGAAWNVSLRPYPAPNIIQGIWLPPESGTVKINTDXXXXX 749
                              K V  A  V        NII  IW       +K NTD     
Sbjct: 209  C-----------------KVVNQATIV--------NIISTIWYNRNQRWIKFNTDGASTA 243

Query: 748  XXXXXXXGVSYRDHEGQFKLTYWRSIGVDNNYRAECLAILEGVELSITRGWLLVWVESDS 569
                      +RD    F   + +++G  + Y+ E  AI+  VE++  R W  +W+ESDS
Sbjct: 244  TSSSCGGV--FRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDS 301

Query: 568  AAAVRAFGS-NFLPWDIRPRWENCLGQL--QHFKITHIWREGNTTADALSKAGVDFQ 407
            A  V AF   + +P  +R RW NC   L   +F ITHI+RE N  AD L+  G+D +
Sbjct: 302  ALVVMAFKKMSMIPCRLRNRWINCRKLLCRMNFVITHIYREDNRCADKLASKGLDIE 358


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 83/294 (28%), Positives = 117/294 (39%), Gaps = 25/294 (8%)
 Frame = -2

Query: 1222 SSCRFCKSEVESLQHILWECSFSRVLWQWTTSRFQTSLTFDNFNEAIKVARLWSPR---- 1055
            SSC FC S +ES  H+  ECS+S+ LW W    +  +      +   ++   W P     
Sbjct: 1088 SSCIFCSSSIESTNHLFLECSYSKELWHWWFQIWNVAWVLP--SSIKELFTHWIPPFKGK 1145

Query: 1054 -LKHLWHSAVASTLVSLWKLRNSIHFEGKPRDINKCKASVKYQVSTTAYLSKAFSFNNER 878
              K +W S     L ++WK RNS  F+ KP          K Q+     L   +      
Sbjct: 1146 FFKKVWMSCFFIILWTIWKERNSRIFQEKPNS--------KLQLKELILLRLGWWIKGWN 1197

Query: 877  DKFVGAA-----------WNVSLRPYPA--PNIIQGIWLPPESGTVKINTDXXXXXXXXX 737
            + F  +A           W   ++P  A  P      W PP  G++K N D         
Sbjct: 1198 EPFPYSAEDIVRNPLCLNWLTPVKPQKAIMPAPFPQHWSPPSIGSLKWNVDASIKSSLQK 1257

Query: 736  XXXGVSYRDHEGQFKLTYWRSIGVDNNYRAECLAILEGVELSIT--RGW-LLVWVESDSA 566
               G   RDH+G F   +   I       AE LAI   +++S    R W   + VESDS+
Sbjct: 1258 SSIGGVLRDHKGNFICMFSSPIPFMEINNAEVLAIHRALKISAACPRIWGSHIIVESDSS 1317

Query: 565  AAVRAFGSNFL-PWD---IRPRWENCLGQLQHFKITHIWREGNTTADALSKAGV 416
             AV     +   PW+   I     N   +     IT+  RE N  ADAL+K G+
Sbjct: 1318 NAVSWCKKDASGPWNLNFILNFIRNSASKDPKVSITYKGRETNMVADALAKQGL 1371