BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013677
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arab...    78   7e-13
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...    74   2e-11
emb|CBI21840.3| unnamed protein product [Vitis vinifera]               69   5e-10

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = +1

Query: 130 LYKRIVPLAGQKVSMISILEQWREEGRFFRKHELVAIIKELRVFKRFKHALEISQWMTEQ 309
           LY+RI P+    +S+  +L+QW  EGR  ++ EL  IIKELRV+KRFKHALEIS+WM+++
Sbjct: 31  LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90

Query: 310 SYIPLS 327
            Y PLS
Sbjct: 91  RYFPLS 96


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = +1

Query: 130 LYKRIVPLAGQKVSMISILEQWREEGRFFRKHELVAIIKELRVFKRFKHALEISQWMTEQ 309
           LY+RI P+    +S+  +L+QW  EGR  ++ EL  IIKELRV+KRFKHALEIS+WM+++
Sbjct: 31  LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90

Query: 310 SYIPLS 327
            Y PLS
Sbjct: 91  RYFPLS 96


>ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
           lyrata] gi|297315706|gb|EFH46129.1| hypothetical protein
           ARALYDRAFT_354609 [Arabidopsis lyrata subsp. lyrata]
          Length = 480

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/66 (51%), Positives = 49/66 (74%)
 Frame = +1

Query: 130 LYKRIVPLAGQKVSMISILEQWREEGRFFRKHELVAIIKELRVFKRFKHALEISQWMTEQ 309
           LYKRI PL   K+S++ +L++WR EG +  K EL  +IKEL  +KRF HALE+S+WM+++
Sbjct: 38  LYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHALEVSRWMSDR 97

Query: 310 SYIPLS 327
            + PLS
Sbjct: 98  MFFPLS 103


>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = +1

Query: 130 LYKRIVPLAGQKVSMISILEQWREEGRFFRKHELVAIIKELRVFKRFKHALEISQWMTEQ 309
           LY+RI P+   KVS++ IL+QW EEG+   K +L   IKELR  KR+ HALEIS WM+++
Sbjct: 51  LYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMSDK 110

Query: 310 SYIPLS 327
            Y  L+
Sbjct: 111 RYFALT 116


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/68 (44%), Positives = 47/68 (69%)
 Frame = +1

Query: 124 EALYKRIVPLAGQKVSMISILEQWREEGRFFRKHELVAIIKELRVFKRFKHALEISQWMT 303
           E+L  RI P    +VS++  LEQWR+EGR  ++ +L  +I++LR FKR+ HALEI +W+ 
Sbjct: 35  ESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIR 94

Query: 304 EQSYIPLS 327
           ++ Y  +S
Sbjct: 95  DKFYFDIS 102