BLASTX nr result

ID: Coptis21_contig00013667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013667
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop...   194   8e-48
ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop...   194   8e-48
emb|CBI23309.3| unnamed protein product [Vitis vinifera]              194   8e-48
emb|CBI23305.3| unnamed protein product [Vitis vinifera]              194   8e-48
emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]   194   8e-48

>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Vitis vinifera]
          Length = 514

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = -3

Query: 350 AFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYLLLGTNLALDQM 171
           A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY+LLGTNLALDQM
Sbjct: 239 ALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQM 298

Query: 170 KVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKL 3
           KV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL
Sbjct: 299 KVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKL 354


>ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Vitis vinifera]
          Length = 590

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = -3

Query: 350 AFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYLLLGTNLALDQM 171
           A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY+LLGTNLALDQM
Sbjct: 386 ALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQM 445

Query: 170 KVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKL 3
           KV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL
Sbjct: 446 KVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKL 501


>emb|CBI23309.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = -3

Query: 350 AFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYLLLGTNLALDQM 171
           A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY+LLGTNLALDQM
Sbjct: 239 ALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQM 298

Query: 170 KVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKL 3
           KV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL
Sbjct: 299 KVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKL 354


>emb|CBI23305.3| unnamed protein product [Vitis vinifera]
          Length = 1459

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = -3

Query: 350 AFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYLLLGTNLALDQM 171
           A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY+LLGTNLALDQM
Sbjct: 231 ALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQM 290

Query: 170 KVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKL 3
           KV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL
Sbjct: 291 KVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKL 346


>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
          Length = 1021

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = -3

Query: 350 AFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYLLLGTNLALDQM 171
           A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY+LLGTNLALDQM
Sbjct: 406 ALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQM 465

Query: 170 KVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKL 3
           KV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL
Sbjct: 466 KVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKL 521


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