BLASTX nr result

ID: Coptis21_contig00013656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013656
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   179   1e-42
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   170   7e-40
emb|CBI16036.3| unnamed protein product [Vitis vinifera]              168   3e-39
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   168   3e-39
gb|AFK40149.1| unknown [Medicago truncatula]                          157   4e-36

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  179 bits (454), Expect = 1e-42
 Identities = 82/119 (68%), Positives = 101/119 (84%)
 Frame = -2

Query: 867 FFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIECLSHSRYIKPGSSHISAGLVQTL 688
           FFWGK + ILFSGWPGTSTGMYVL+L+ +F L++ +E LSH R +KPGS++++AGL+Q L
Sbjct: 34  FFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQAL 93

Query: 687 MHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDIPP 511
           MH +RVGL+Y+VMLAVMSFNGGVF+VAVAGH VGFFIFGSRVFK  E+  Y K  D+PP
Sbjct: 94  MHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPPYHKTSDLPP 152


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  170 bits (430), Expect = 7e-40
 Identities = 81/138 (58%), Positives = 103/138 (74%)
 Frame = -2

Query: 927 PSNNNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIECLS 748
           P+N+ G             TF+WGK +EILFSGWPG  +GMY L+LIVVF + + +E LS
Sbjct: 14  PANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLS 73

Query: 747 HSRYIKPGSSHISAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGS 568
           + R IKPGS+H +AGLVQTL+H IR+GL+Y+VMLA+MSFNGGVFLVAVAGH+VGF +FGS
Sbjct: 74  YCRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGS 133

Query: 567 RVFKPEEVAQYEKQRDIP 514
           RV +  E+   EK  D+P
Sbjct: 134 RVCRGSEMVSLEKTSDLP 151


>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  168 bits (425), Expect = 3e-39
 Identities = 81/143 (56%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -2

Query: 927 PSNNNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIECLS 748
           P+N+ G             TF+WGK +EILFSGWPGT +GMY L+LIVVF +++ +E LS
Sbjct: 18  PANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLS 77

Query: 747 HSRYIKPGSSHISAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGS 568
           H + IKPGS+H++AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGS
Sbjct: 78  HFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGS 137

Query: 567 RVFKPEEVAQ-YEKQRDIPPMTC 502
           R+F+  E  +  EK   + PM+C
Sbjct: 138 RLFRGSETLRPSEKAFYLSPMSC 160


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  168 bits (425), Expect = 3e-39
 Identities = 81/143 (56%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -2

Query: 927 PSNNNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIECLS 748
           P+N+ G             TF+WGK +EILFSGWPGT +GMY L+LIVVF +++ +E LS
Sbjct: 35  PANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLS 94

Query: 747 HSRYIKPGSSHISAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGS 568
           H + IKPGS+H++AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGS
Sbjct: 95  HFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGS 154

Query: 567 RVFKPEEVAQ-YEKQRDIPPMTC 502
           R+F+  E  +  EK   + PM+C
Sbjct: 155 RLFRGSETLRPSEKAFYLSPMSC 177


>gb|AFK40149.1| unknown [Medicago truncatula]
          Length = 164

 Score =  157 bits (398), Expect = 4e-36
 Identities = 73/122 (59%), Positives = 100/122 (81%)
 Frame = -2

Query: 867 FFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIECLSHSRYIKPGSSHISAGLVQTL 688
           FFWGK + ILF+ WP   TGMYVL+LI+VF +++ IE LS +R+IKPGS+H++AGL QTL
Sbjct: 46  FFWGKDALILFNNWPNGDTGMYVLALILVFVMAVLIELLSRTRFIKPGSNHVAAGLFQTL 105

Query: 687 MHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDIPPM 508
           +H++RVGL+YLVMLA+MSFNGGVFLVAV GH++GFF+  S   KP+   Q+++  D+PP+
Sbjct: 106 LHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSSAFRKPK---QHDEAYDLPPL 162

Query: 507 TC 502
           +C
Sbjct: 163 SC 164


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