BLASTX nr result

ID: Coptis21_contig00013647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013647
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...   402   e-110
ref|XP_002266413.2| PREDICTED: U-box domain-containing protein 3...   396   e-108
emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]   395   e-107
ref|XP_002518240.1| ATP binding protein, putative [Ricinus commu...   391   e-106
emb|CAN79719.1| hypothetical protein VITISV_012742 [Vitis vinifera]   387   e-105

>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score =  402 bits (1034), Expect = e-110
 Identities = 212/318 (66%), Positives = 240/318 (75%), Gaps = 2/318 (0%)
 Frame = +2

Query: 2    PDADISFVSSGRPSTERMFPSLYD-HFDSGRTPTRLSNSSDIDNRSVDSMRSGNRSPDLS 178
            PD+DISFVSSGRPST+RMFP  YD + D  R+  RLSNSSD+DN++ +S + G +S ++ 
Sbjct: 251  PDSDISFVSSGRPSTDRMFPPFYDSNIDIIRSNPRLSNSSDMDNQTFESSQMGRKSMEIG 310

Query: 179  YANEYSTFSQESG-TSWSSQNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMEL 355
               E+   SQE+  TSWSSQ+ EDVEAEMRRLKLELKQTMDMYSTACKEAL+AKQKA EL
Sbjct: 311  SPPEFLAISQENDRTSWSSQSAEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQKAREL 370

Query: 356  HRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKRINAEMKA 535
             RWK+                                             QKRINAEMKA
Sbjct: 371  QRWKLEEEQRLEEARLAEEAALAIAEREKAKSRAAIEHAEAAQRIAELEAQKRINAEMKA 430

Query: 536  LKESQEKLKVLDALAQSDVRYRKYPIEEIENATEFFAEPRKIGEGGYGPVYKGYLDHTAV 715
            +KE++EK KVLD+LAQ+DVRYRKY IEEIE+ATEFF+E RKIGEGGYGPVYK  LDHT V
Sbjct: 431  IKEAEEKKKVLDSLAQTDVRYRKYTIEEIESATEFFSESRKIGEGGYGPVYKCNLDHTQV 490

Query: 716  AIKVLRPDAAQGRSQFQQEIEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFR 895
            AIKVLRPDAAQGRSQFQQE+EVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSL+DRLFR
Sbjct: 491  AIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFR 550

Query: 896  RGNTPVLPWQLRFRIAAE 949
            RG++P L WQLRFRIAAE
Sbjct: 551  RGDSPPLSWQLRFRIAAE 568


>ref|XP_002266413.2| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 806

 Score =  396 bits (1017), Expect = e-108
 Identities = 210/326 (64%), Positives = 237/326 (72%), Gaps = 10/326 (3%)
 Frame = +2

Query: 2    PDADISFVSSGRPSTERMFPSLYDHFDSGRTP---------TRLSNSSDIDNRSVDSMRS 154
            P+ DISFVSSGRPS + +FP  YD+ D+G  P          RLSNSSD++ R +    S
Sbjct: 249  PETDISFVSSGRPSIDHIFPFSYDNLDTGMNPWLSNSSEMNPRLSNSSDLNTR-LSFASS 307

Query: 155  GNRSPDLSYANEYSTFSQESGT-SWSSQNMEDVEAEMRRLKLELKQTMDMYSTACKEALT 331
            G RS +L+Y+ + S+ S ESG  SW+SQ+MEDVEAEMRRLKLELKQTMDMYSTACKEAL+
Sbjct: 308  GGRSSELNYSLDLSSSSNESGRLSWASQSMEDVEAEMRRLKLELKQTMDMYSTACKEALS 367

Query: 332  AKQKAMELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 511
            AKQ A ELHRWKM                                             QK
Sbjct: 368  AKQTARELHRWKMEEAQRLGEARLAEEAALATAEREKAKAKAALEAAEASQRIAKLEAQK 427

Query: 512  RINAEMKALKESQEKLKVLDALAQSDVRYRKYPIEEIENATEFFAEPRKIGEGGYGPVYK 691
            RINAEM A+KE++E+ K+L+ LAQ+D+RYRKY IEEIE ATE F+E RKIGEGGYGPVYK
Sbjct: 428  RINAEMVAIKEAEERKKMLNTLAQTDLRYRKYTIEEIEAATELFSESRKIGEGGYGPVYK 487

Query: 692  GYLDHTAVAIKVLRPDAAQGRSQFQQEIEVLSCIRHPNMVLLLGACPEYGCLVYEYMANG 871
             YLDHT VAIKVLRPDAAQGRSQFQQE+EVLSCIRHPNMVLLLGACPEYGCLVYEYMANG
Sbjct: 488  SYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANG 547

Query: 872  SLDDRLFRRGNTPVLPWQLRFRIAAE 949
            SLDD LFRRGNTPVLPWQLRF+IAAE
Sbjct: 548  SLDDHLFRRGNTPVLPWQLRFQIAAE 573


>emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]
          Length = 768

 Score =  395 bits (1014), Expect = e-107
 Identities = 209/314 (66%), Positives = 236/314 (75%), Gaps = 2/314 (0%)
 Frame = +2

Query: 14   ISFVSSGRPSTERMFPSLYD-HFDSGRTPTRLSNSSDIDNRSVDSMRSGNRSPDLSYANE 190
            ISFVSSGRPST+RMFP  YD + D  R+  RLSNSSD+DN++ +S + G +S ++    E
Sbjct: 227  ISFVSSGRPSTDRMFPPFYDSNIDIIRSNPRLSNSSDMDNQTFESSQMGRKSMEIGSPPE 286

Query: 191  YSTFSQESG-TSWSSQNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWK 367
            +   SQE+  TSWSSQ+ EDVEAEMRRLKLELKQTMDMYSTACKEAL+AKQKA EL RWK
Sbjct: 287  FLAISQENDRTSWSSQSAEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQKARELQRWK 346

Query: 368  MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKRINAEMKALKES 547
            +                                             QKRINAEMKA+KE+
Sbjct: 347  LEEEQRLEEARLAEEAALAIAEREKAKSRAAIEHAEAAQRIAELEAQKRINAEMKAIKEA 406

Query: 548  QEKLKVLDALAQSDVRYRKYPIEEIENATEFFAEPRKIGEGGYGPVYKGYLDHTAVAIKV 727
            +EK KVLD+LAQ+DVRYRKY IEEIE+ATEFF+E RKIGEGGYGPVYK  LDHT VAIKV
Sbjct: 407  EEKKKVLDSLAQTDVRYRKYTIEEIESATEFFSESRKIGEGGYGPVYKCNLDHTQVAIKV 466

Query: 728  LRPDAAQGRSQFQQEIEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRGNT 907
            LRPDAAQGRSQFQQE+EVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSL+DRLFRRG++
Sbjct: 467  LRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFRRGDS 526

Query: 908  PVLPWQLRFRIAAE 949
            P L WQLRFRIAAE
Sbjct: 527  PPLSWQLRFRIAAE 540


>ref|XP_002518240.1| ATP binding protein, putative [Ricinus communis]
            gi|223542587|gb|EEF44126.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 802

 Score =  391 bits (1004), Expect = e-106
 Identities = 210/320 (65%), Positives = 235/320 (73%), Gaps = 4/320 (1%)
 Frame = +2

Query: 2    PDADISFVSSGRPSTERMFPSLYDHFDSGRTPTRLSNSSDIDN-RSVDSMRSGNRSPDLS 178
            PD DISFVSSGRPS +RMFP+ YD  + G    RLSN SDID+ +S +SM+ G RS D++
Sbjct: 268  PDTDISFVSSGRPSIDRMFPAFYDVLEMGARNQRLSNVSDIDSIQSFESMQFGRRSIDIN 327

Query: 179  YAN--EYSTFSQESGT-SWSSQNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAM 349
              +  E+S+ S +S   S +SQ M+DVEAEMRRLKLELKQTM+MYSTACKEALTAK+K  
Sbjct: 328  IGSPPEFSSMSYDSDRLSTASQPMDDVEAEMRRLKLELKQTMEMYSTACKEALTAKEKTR 387

Query: 350  ELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKRINAEM 529
            EL  WK+                                             QKR++AEM
Sbjct: 388  ELQLWKLEEEQRLEEARLAEETALAIAEKEKAKSKAAIEAAEAAQRIAELEAQKRVSAEM 447

Query: 530  KALKESQEKLKVLDALAQSDVRYRKYPIEEIENATEFFAEPRKIGEGGYGPVYKGYLDHT 709
            KAL+ESQEK K LDALA SD+RYRKY IEEIE ATEFF+E RKIGEGGYGPVYK YLDHT
Sbjct: 448  KALRESQEKKKALDALAHSDIRYRKYSIEEIEAATEFFSESRKIGEGGYGPVYKCYLDHT 507

Query: 710  AVAIKVLRPDAAQGRSQFQQEIEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRL 889
            +VAIKVLRPDAAQGRSQFQQE+EVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRL
Sbjct: 508  SVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRL 567

Query: 890  FRRGNTPVLPWQLRFRIAAE 949
            FRRGNTP L WQLRFRIAAE
Sbjct: 568  FRRGNTPPLSWQLRFRIAAE 587


>emb|CAN79719.1| hypothetical protein VITISV_012742 [Vitis vinifera]
          Length = 826

 Score =  387 bits (994), Expect = e-105
 Identities = 212/356 (59%), Positives = 238/356 (66%), Gaps = 40/356 (11%)
 Frame = +2

Query: 2    PDADISFVSSGRPSTERMFPSLYDHFDSGRTP---------------------------- 97
            P+ DISFVSSGRPS + +FP  YD+ D+G  P                            
Sbjct: 250  PETDISFVSSGRPSIDHIFPFSYDNLDTGMNPWLSNSSEMNPRLSNSSDLNTRLSIGSEM 309

Query: 98   -----------TRLSNSSDIDNRSVDSMRSGNRSPDLSYANEYSTFSQESGT-SWSSQNM 241
                       TRLSN S++D RS  S  SG RS +L+Y+ + S+ S ESG  SW+SQ+M
Sbjct: 310  NPRLSNSSDLNTRLSNGSELDCRSFAS--SGGRSSELNYSLDLSSSSNESGRLSWASQSM 367

Query: 242  EDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKMXXXXXXXXXXXXXXXXX 421
            EDVEAEMRRLKLELKQTMDMYSTACKEAL+AKQ A ELHRWKM                 
Sbjct: 368  EDVEAEMRRLKLELKQTMDMYSTACKEALSAKQTARELHRWKMEEAQRLGEARLAEEAAL 427

Query: 422  XXXXXXXXXXXXXXXXXXXXXXXXXXXXQKRINAEMKALKESQEKLKVLDALAQSDVRYR 601
                                        QKRINAEM A+KE++E+ K+L+ LAQ+D+RYR
Sbjct: 428  ATAEREKAKAKAALEAAEASQRIAKLEAQKRINAEMVAIKEAEERKKMLNTLAQTDLRYR 487

Query: 602  KYPIEEIENATEFFAEPRKIGEGGYGPVYKGYLDHTAVAIKVLRPDAAQGRSQFQQEIEV 781
            KY IEEIE ATE F+E RKIGEGGYGPVYK YLDHT VAIKVLRPDAAQGRSQFQQE+EV
Sbjct: 488  KYTIEEIEAATELFSESRKIGEGGYGPVYKSYLDHTPVAIKVLRPDAAQGRSQFQQEVEV 547

Query: 782  LSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRGNTPVLPWQLRFRIAAE 949
            LSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDD LFRRGNTPVLPWQLRF+IAAE
Sbjct: 548  LSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDHLFRRGNTPVLPWQLRFQIAAE 603


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