BLASTX nr result

ID: Coptis21_contig00013643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013643
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isof...   216   2e-54
ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isof...   216   2e-54
ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like...   211   6e-53
ref|XP_002529160.1| tubulin-specific chaperone B, putative [Rici...   207   9e-52
ref|XP_004169395.1| PREDICTED: tubulin-specific chaperone B-like...   201   5e-50

>ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isoform 2 [Vitis vinifera]
          Length = 243

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/131 (80%), Positives = 119/131 (90%)
 Frame = -2

Query: 394 ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPLESIKDKLWKKTGTSVDSMCLELY 215
           A+RLQ +  D+SV LRVTH N+K+FSADVRFSLQ  +ES+KDKLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQ-IQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 214 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 35
           DD GAK+S LSDNL+PLGFYSP DGYR+H+IDLDPSSVTSGGWLEDTSLVEKYSISEEAY
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 34  DKLGGTFRKFK 2
           +KL GTFRKFK
Sbjct: 121 EKLDGTFRKFK 131


>ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera]
           gi|359482231|ref|XP_003632738.1| PREDICTED:
           tubulin-specific chaperone B [Vitis vinifera]
           gi|297739921|emb|CBI30103.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/131 (80%), Positives = 119/131 (90%)
 Frame = -2

Query: 394 ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPLESIKDKLWKKTGTSVDSMCLELY 215
           A+RLQ +  D+SV LRVTH N+K+FSADVRFSLQ  +ES+KDKLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQ-IQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 214 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 35
           DD GAK+S LSDNL+PLGFYSP DGYR+H+IDLDPSSVTSGGWLEDTSLVEKYSISEEAY
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 34  DKLGGTFRKFK 2
           +KL GTFRKFK
Sbjct: 121 EKLDGTFRKFK 131


>ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 245

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/131 (76%), Positives = 118/131 (90%)
 Frame = -2

Query: 394 ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPLESIKDKLWKKTGTSVDSMCLELY 215
           A+RLQ +  D+SVLLRVTH+NLK+F++DVRFSLQ  +ES+K+KLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELY 61

Query: 214 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 35
           DD+G+K+SDL+DN  PLGFYSP DGYR+HIIDLDPSSVTSGGWLEDTSLVEK+ ISEEAY
Sbjct: 62  DDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAY 121

Query: 34  DKLGGTFRKFK 2
           DK   TFRKFK
Sbjct: 122 DKRDDTFRKFK 132


>ref|XP_002529160.1| tubulin-specific chaperone B, putative [Ricinus communis]
           gi|223531384|gb|EEF33219.1| tubulin-specific chaperone
           B, putative [Ricinus communis]
          Length = 243

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/130 (73%), Positives = 118/130 (90%)
 Frame = -2

Query: 391 NRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPLESIKDKLWKKTGTSVDSMCLELYD 212
           ++LQ +  D+SV+LR+THSNLKTFSADVRFSL++ +ES+K+KLW+K GTSV+SM L+LYD
Sbjct: 3   SKLQKIEGDESVVLRITHSNLKTFSADVRFSLESTVESVKEKLWRKCGTSVNSMTLQLYD 62

Query: 211 DAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSVTSGGWLEDTSLVEKYSISEEAYD 32
           D  +K+ DLSD+ +PLGFYSP DGYR+H+ID+DPSSVTSGGWLEDTSLVEKY+ISEEAY+
Sbjct: 63  DTNSKICDLSDDSRPLGFYSPLDGYRIHVIDVDPSSVTSGGWLEDTSLVEKYTISEEAYE 122

Query: 31  KLGGTFRKFK 2
           K GGTFRKFK
Sbjct: 123 KRGGTFRKFK 132


>ref|XP_004169395.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 126

 Score =  201 bits (511), Expect = 5e-50
 Identities = 95/125 (76%), Positives = 113/125 (90%)
 Frame = -2

Query: 394 ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPLESIKDKLWKKTGTSVDSMCLELY 215
           A+RLQ +  D+SVLLRVTH+NLK+F++DVRFSLQ  +ES+K+KLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELY 61

Query: 214 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 35
           DD+G+K+SDL+DN  PLGFYSP DGYR+HIIDLDPSSVTSGGWLEDTSLVEK+ ISEEAY
Sbjct: 62  DDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAY 121

Query: 34  DKLGG 20
           DK  G
Sbjct: 122 DKRDG 126