BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013641
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    76   1e-13
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-12
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-12
dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana] g...    77   7e-12

>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 75.9 bits (185), Expect(2) = 1e-13
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
 Frame = +3

Query: 96   DLVVWTPSSS---GKFFTKSTYMTLKKMRAKVAWYKLVWGKYTVPKHSFITWQLFAGCLA 266
            D VVW   +     +F T+ T+  ++    KV WYK VW     PK SF  W      L+
Sbjct: 1247 DDVVWRGRNDIYKPQFSTRDTWNNIRTTATKVTWYKGVWFYQATPKFSFCVWLAALDRLS 1306

Query: 267  TQDRLIHKKILTHSRCCFCAHPENSK-HRFFNCVYSRKVWAEMKIKLGLGAVVHESTIEW 443
            T DR+ + K ++   C FC HP  S+ H FFNC YS +VW      +    +    T +W
Sbjct: 1307 TGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEVWTVTAKNI----LTTRFTTDW 1362

Query: 444  QFILRASRS---NSVASEIELWSVQRSM 518
              +L    S   N V + +  ++ Q S+
Sbjct: 1363 HLLLNTVSSLQQNRVENFLVRYAFQASV 1390



 Score = 27.7 bits (60), Expect(2) = 1e-13
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 506  ATVYGLRNKRNSRKFKNILHTADTLHRDIVERMRTYLQRV 625
            A+VY + ++RN R+  N LH+A  L   I +++R  L  +
Sbjct: 1388 ASVYSIWSERNRRRHGNTLHSATRLIGWIDKQVRNILSSI 1427


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
 Frame = +3

Query: 93   KDLVVWTPSSSGKFFTKSTYMTLKKMRAKVAWYKLVWGKYTVPKHSFITWQLFAGCLATQ 272
            KD +VW  S + +F  K  +  L++ R  V W+ +VW K  VP+HSF+ W      L TQ
Sbjct: 1184 KDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQ 1243

Query: 273  DRLIHKKILTHSRCCFC-AHPENSKHRFFNCVYSRKVWAEM-------KIKLGLGAVVHE 428
            D+L    I   +RC  C  + E+  H FF C Y++ +W ++       ++  G    +  
Sbjct: 1244 DKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRW 1303

Query: 429  STIEW---QFILRASRSNSVASEIELWSVQRSMGF 524
            +T+ W    F+  + + +  A+   +W  + +  F
Sbjct: 1304 ATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIF 1338


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
 Frame = +3

Query: 93   KDLVVWTPSSSGKFFTKSTYMTLKKMRAKVAWYKLVWGKYTVPKHSFITWQLFAGCLATQ 272
            KD ++W  S + +F  K  +  L++ R  V W+ +VW K  VP+HSF+ W +    L TQ
Sbjct: 844  KDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQ 903

Query: 273  DRLIHKKILTHSRCCFC-AHPENSKHRFFNCVYSRKVWAEM-------KIKLGLGAVVHE 428
            D+L    I   +RC  C  + E+  H FF C Y++ +W ++       ++  G    +  
Sbjct: 904  DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRW 963

Query: 429  STIEW---QFILRASRSNSVASEIELWSVQRSMGF 524
            +T+ W    FI  + + +  A+   +W  + +  F
Sbjct: 964  ATVSWHGKSFINFSRKLSFAATVYHVWQERNARIF 998


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
 Frame = +3

Query: 93  KDLVVWTPSSSGKFFTKSTYMTLKKMRAKVAWYKLVWGKYTVPKHSFITWQLFAGCLATQ 272
           KD +VW  S + +F  K  +  L++ R  V W+ +VW K  VP+HSF+ W +    L TQ
Sbjct: 129 KDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQ 188

Query: 273 DRLIHKKILTHSRCCFC-AHPENSKHRFFNCVYSRKVWAEM-------KIKLGLGAVVHE 428
           D+L    I   +RC  C  + E+  H FF C Y++ +W ++       ++  G    +  
Sbjct: 189 DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRW 248

Query: 429 STIEW---QFILRASRSNSVASEIELWSVQRSMGF 524
           +T+ W    F+  + + +  A+   +W  + +  F
Sbjct: 249 ATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIF 283


>dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana]
           gi|49823524|gb|AAT68745.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
           gi|60547763|gb|AAX23845.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
          Length = 310

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
 Frame = +3

Query: 84  NIA--KDLVVWT---PSSSGKFFTKSTYMTLKKMRAKVAWYKLVWGKYTVPKHSFITWQL 248
           NIA  +D+ +W     S   KF T  T+  ++  + ++  YK VW  ++ PK+SFITW +
Sbjct: 101 NIAGERDIALWKGEKDSYRNKFVTSETWRQIRNAKPEMEGYKGVWFSHSTPKYSFITWLV 160

Query: 249 FAGCLATQDRLIHKKILTHSRCCFCAHP-ENSKHRFFNCVYSRKVWAEMKIKLGLGAVVH 425
               +AT DR++      ++ C  C  P E   H FF C YSRKVW ++   +    + H
Sbjct: 161 SKNRMATGDRMVLWNQHVNTSCSLCDEPMETRDHLFFVCTYSRKVWEDIAKPI----LQH 216

Query: 426 ESTIEWQFIL 455
             +++W+ IL
Sbjct: 217 RFSLDWKDIL 226