BLASTX nr result

ID: Coptis21_contig00013639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013639
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513395.1| LOB domain-containing protein, putative [Ric...   241   1e-61
ref|XP_002310683.1| predicted protein [Populus trichocarpa] gi|2...   240   4e-61
ref|NP_174417.1| LOB domain-containing protein 4 [Arabidopsis th...   239   9e-61
ref|XP_002893847.1| LOB domain protein 4 [Arabidopsis lyrata sub...   237   3e-60
ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|2...   237   3e-60

>ref|XP_002513395.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223547303|gb|EEF48798.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 147

 Score =  241 bits (616), Expect = 1e-61
 Identities = 125/169 (73%), Positives = 133/169 (78%)
 Frame = +1

Query: 202 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 381
           +KE+GRK GA SPCAACKLLRRRCAQDCVF+PYFPADEPQKFA+VHKVFGASNVNKMLQE
Sbjct: 1   MKESGRKQGALSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQE 60

Query: 382 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 561
           LPEHQR DAVSSMVYEANARVRDPVYGCVGAISSLQQQID LQTQLAIAQAEVVH+RMRQ
Sbjct: 61  LPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLAIAQAEVVHMRMRQ 120

Query: 562 TTXXXXXXXXXXXXXXXXXXXXXXXXXXXMFSMELVVDQANMGESLWSC 708
                                          +M++VVDQAN GESLWSC
Sbjct: 121 ----------------------FGTSSSNPSAMDMVVDQANAGESLWSC 147


>ref|XP_002310683.1| predicted protein [Populus trichocarpa] gi|222853586|gb|EEE91133.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  240 bits (612), Expect = 4e-61
 Identities = 123/169 (72%), Positives = 133/169 (78%)
 Frame = +1

Query: 202 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 381
           +KE+GRKLGA SPCAACKLLRRRCAQDC+F+PYFPADEPQKFA+VHKVFGASNVNKMLQE
Sbjct: 1   MKESGRKLGALSPCAACKLLRRRCAQDCMFAPYFPADEPQKFASVHKVFGASNVNKMLQE 60

Query: 382 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 561
           LPEHQR DAVSSMVYEANARVRDPVYGCVGAISSLQ+QID LQTQLAIAQAEVVH+R+RQ
Sbjct: 61  LPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQKQIDSLQTQLAIAQAEVVHMRVRQ 120

Query: 562 TTXXXXXXXXXXXXXXXXXXXXXXXXXXXMFSMELVVDQANMGESLWSC 708
            T                              M++ VDQA MGESLWSC
Sbjct: 121 FTSSSNPGV-----------------------MDMAVDQATMGESLWSC 146


>ref|NP_174417.1| LOB domain-containing protein 4 [Arabidopsis thaliana]
           gi|29428037|sp|Q9SHE9.1|LBD4_ARATH RecName: Full=LOB
           domain-containing protein 4; AltName: Full=ASYMMETRIC
           LEAVES 2-like protein 6; Short=AS2-like protein 6
           gi|6692123|gb|AAF24588.1|AC007654_4 T19E23.11
           [Arabidopsis thaliana] gi|50253474|gb|AAT71939.1|
           At1g31320 [Arabidopsis thaliana]
           gi|51972120|gb|AAU15164.1| At1g31320 [Arabidopsis
           thaliana] gi|219807088|dbj|BAH10550.1| ASYMMETRIC
           LEAVES2-like 6 protein [Arabidopsis thaliana]
           gi|332193220|gb|AEE31341.1| LOB domain-containing
           protein 4 [Arabidopsis thaliana]
          Length = 172

 Score =  239 bits (609), Expect = 9e-61
 Identities = 123/172 (71%), Positives = 134/172 (77%), Gaps = 3/172 (1%)
 Frame = +1

Query: 202 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 381
           +KE+ RK GA SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVH+VFGASNVNKMLQE
Sbjct: 1   MKESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQE 60

Query: 382 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 561
           LP HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQ QLA+AQAEVVHLR+RQ
Sbjct: 61  LPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQ 120

Query: 562 TT---XXXXXXXXXXXXXXXXXXXXXXXXXXXMFSMELVVDQANMGESLWSC 708
           +T                              MFS   +VD+A++GES+WSC
Sbjct: 121 STNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172


>ref|XP_002893847.1| LOB domain protein 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297339689|gb|EFH70106.1| LOB domain protein 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  237 bits (604), Expect = 3e-60
 Identities = 122/172 (70%), Positives = 133/172 (77%), Gaps = 3/172 (1%)
 Frame = +1

Query: 202 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 381
           +KE+ RK GA SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVH+VFGASNVNKMLQE
Sbjct: 1   MKESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQE 60

Query: 382 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 561
           LP HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQ QLA+AQAEVVHLR+R 
Sbjct: 61  LPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRH 120

Query: 562 TT---XXXXXXXXXXXXXXXXXXXXXXXXXXXMFSMELVVDQANMGESLWSC 708
           +T                              MFS   +VD+A++GES+WSC
Sbjct: 121 STNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172


>ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|222845193|gb|EEE82740.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  237 bits (604), Expect = 3e-60
 Identities = 122/171 (71%), Positives = 132/171 (77%), Gaps = 2/171 (1%)
 Frame = +1

Query: 202 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 381
           +KE GRK GA +PCAACKLLRRRCAQDCVF+PYFPADEPQKFANVHKVFGASNVNKMLQE
Sbjct: 1   MKEGGRKQGAPAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQE 60

Query: 382 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 561
           LP HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQID LQTQLA+AQAEVVHLR+RQ
Sbjct: 61  LPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQ 120

Query: 562 TTXXXXXXXXXXXXXXXXXXXXXXXXXXX--MFSMELVVDQANMGESLWSC 708
           T                              MF M++V D  ++GES+WSC
Sbjct: 121 TATLSNHGLSPASPSNSGSPSSRLMGSQMKPMFDMDMV-DHTSLGESMWSC 170


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