BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013633
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]              239   8e-61
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...   239   8e-61
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   226   7e-57
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   224   3e-56
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   209   1e-51

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  239 bits (610), Expect = 8e-61
 Identities = 113/168 (67%), Positives = 133/168 (79%)
 Frame = +3

Query: 3   KEWESSGNSYDFRVPNVILIAYSKSGLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQK 182
           KEWESSGN YDFRVPN +LI + + GL EKAE+ML D+ E+GK P PNSW IVAAGY++K
Sbjct: 337 KEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEK 396

Query: 183 NEMEKAVRCIKMAFSVNKNGGGWKPNPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMN 362
             MEKA  C+K A +V     GW+P PKVISSILSWLGD  +VEEVE FV  LK  +PM+
Sbjct: 397 QNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMD 456

Query: 363 KNMYHALIKAKVRAGKDVDGLLDSMKTDKIDEDEETKKILSLKEDKAE 506
           + MYHA I+A +RAGK+VDG+LDSMK DKIDEDEET+KILSLK DKAE
Sbjct: 457 REMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKILSLKHDKAE 504


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score =  239 bits (610), Expect = 8e-61
 Identities = 113/168 (67%), Positives = 133/168 (79%)
 Frame = +3

Query: 3   KEWESSGNSYDFRVPNVILIAYSKSGLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQK 182
           KEWESSGN YDFRVPN +LI + + GL EKAE+ML D+ E+GK P PNSW IVAAGY++K
Sbjct: 337 KEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEK 396

Query: 183 NEMEKAVRCIKMAFSVNKNGGGWKPNPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMN 362
             MEKA  C+K A +V     GW+P PKVISSILSWLGD  +VEEVE FV  LK  +PM+
Sbjct: 397 QNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMD 456

Query: 363 KNMYHALIKAKVRAGKDVDGLLDSMKTDKIDEDEETKKILSLKEDKAE 506
           + MYHA I+A +RAGK+VDG+LDSMK DKIDEDEET+KILSLK DKAE
Sbjct: 457 REMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKILSLKHDKAE 504


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  226 bits (576), Expect = 7e-57
 Identities = 109/166 (65%), Positives = 132/166 (79%)
 Frame = +3

Query: 3   KEWESSGNSYDFRVPNVILIAYSKSGLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQK 182
           +EWESSGN YDFRVPN+++I YS+ GL EKAEAML++L EKGKI  PNSWG VA+GY+ +
Sbjct: 340 REWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASGYMDE 399

Query: 183 NEMEKAVRCIKMAFSVNKNGGGWKPNPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMN 362
            EMEKAV C+K A S++ N  G KPN +VI+ ILSWLGD   VE+VEAFVG L+  +PMN
Sbjct: 400 GEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMN 459

Query: 363 KNMYHALIKAKVRAGKDVDGLLDSMKTDKIDEDEETKKILSLKEDK 500
           + MYH LI A +RAGK+VDGLL SMK DKI EDEETKKIL  K++K
Sbjct: 460 RRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKILGTKQNK 505


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  224 bits (571), Expect = 3e-56
 Identities = 108/166 (65%), Positives = 132/166 (79%)
 Frame = +3

Query: 3   KEWESSGNSYDFRVPNVILIAYSKSGLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQK 182
           +EWESSGN YDFRVPN+++I YS+ GL EKAEAML++L EKGKI  P+SWG VA+GY+ +
Sbjct: 340 REWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDE 399

Query: 183 NEMEKAVRCIKMAFSVNKNGGGWKPNPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMN 362
            EMEKAV C+K A S++ N  G KPN +VI+ ILSWLGD   VE+VEAFVG L+  +PMN
Sbjct: 400 GEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMN 459

Query: 363 KNMYHALIKAKVRAGKDVDGLLDSMKTDKIDEDEETKKILSLKEDK 500
           + MYH LI A +RAGK+VDGLL SMK DKI EDEETKKIL  K++K
Sbjct: 460 RRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKILGTKQNK 505


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  209 bits (531), Expect = 1e-51
 Identities = 95/164 (57%), Positives = 124/164 (75%)
 Frame = +3

Query: 3   KEWESSGNSYDFRVPNVILIAYSKSGLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQK 182
           KEWESSGN YD R+PN++++ YSK+GL EKAEA LE L EKG+   PNSW ++A+GY++K
Sbjct: 315 KEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNSWAMIASGYLEK 374

Query: 183 NEMEKAVRCIKMAFSVNKNGGGWKPNPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMN 362
            E  KA  C+K AFS+N    GWKPNP+V+  IL WLGD    E+VEAFV  L   +P+N
Sbjct: 375 GEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDVEAFVASLSVAIPLN 434

Query: 363 KNMYHALIKAKVRAGKDVDGLLDSMKTDKIDEDEETKKILSLKE 494
           + +YHAL+KAK+R+G+D   +LD MKTDKIDEDEETK+IL + +
Sbjct: 435 RQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEETKEILGISK 478