BLASTX nr result

ID: Coptis21_contig00013615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013615
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   232   3e-59
emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]   232   4e-59
ref|XP_003524757.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   228   5e-58
ref|XP_003531054.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   225   5e-57
ref|NP_566792.1| methyltransferase / nucleic acid binding protei...   218   7e-55

>ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
           [Vitis vinifera]
          Length = 477

 Score =  232 bits (592), Expect = 3e-59
 Identities = 109/154 (70%), Positives = 123/154 (79%)
 Frame = -2

Query: 505 VFDAIICDPPYXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLF 326
           VFDAIICDPPY                G + PYTVPDDKR DHIPSTA YSLAEC+HDL 
Sbjct: 294 VFDAIICDPPYGVRAGGRKSGGRKLLKGVISPYTVPDDKRTDHIPSTAAYSLAECVHDLL 353

Query: 325 ELAARMLVMGGRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKK 146
           ++AA+MLVMGGRLV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK 
Sbjct: 354 DVAAKMLVMGGRLVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKI 413

Query: 145 GPYSEEIAEAAVKMHLDFRENHLKWLEDGKLHSA 44
           GPY+EEIAE A   HL+F+ENHLKWLE+G LH+A
Sbjct: 414 GPYTEEIAETARLKHLEFKENHLKWLEEGNLHAA 447


>emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]
          Length = 477

 Score =  232 bits (591), Expect = 4e-59
 Identities = 109/154 (70%), Positives = 123/154 (79%)
 Frame = -2

Query: 505 VFDAIICDPPYXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLF 326
           VFDAIICDPPY                G + PYTVPDDKR DHIPSTA YSLAEC+HDL 
Sbjct: 294 VFDAIICDPPYGVRAGGRKSGGRKLLKGVIGPYTVPDDKRTDHIPSTAAYSLAECVHDLL 353

Query: 325 ELAARMLVMGGRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKK 146
           ++AA+MLVMGGRLV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK 
Sbjct: 354 DVAAKMLVMGGRLVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKI 413

Query: 145 GPYSEEIAEAAVKMHLDFRENHLKWLEDGKLHSA 44
           GPY+EEIAE A   HL+F+ENHLKWLE+G LH+A
Sbjct: 414 GPYTEEIAETARLKHLEFKENHLKWLEEGNLHAA 447


>ref|XP_003524757.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
           [Glycine max]
          Length = 483

 Score =  228 bits (581), Expect = 5e-58
 Identities = 106/154 (68%), Positives = 124/154 (80%)
 Frame = -2

Query: 505 VFDAIICDPPYXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLF 326
           VFDAIICDPPY                G V+PYT+PD+KR +HIPSTA YSL EC+HDLF
Sbjct: 300 VFDAIICDPPYGVRAGGRKSGGRKLLKGAVEPYTIPDEKRTNHIPSTAAYSLVECVHDLF 359

Query: 325 ELAARMLVMGGRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKK 146
           +LAA+ML+MGGRLVFFYPVLREDG  + HFPEHPCF L+++ EQILS RYSR+LLTMVK 
Sbjct: 360 DLAAKMLLMGGRLVFFYPVLREDGFPENHFPEHPCFKLISSSEQILSSRYSRVLLTMVKT 419

Query: 145 GPYSEEIAEAAVKMHLDFRENHLKWLEDGKLHSA 44
           GPY+EEIAEAA K H++F+ENH+KWLEDG LHSA
Sbjct: 420 GPYTEEIAEAARKKHIEFKENHVKWLEDGNLHSA 453


>ref|XP_003531054.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
           [Glycine max]
          Length = 483

 Score =  225 bits (573), Expect = 5e-57
 Identities = 105/154 (68%), Positives = 123/154 (79%)
 Frame = -2

Query: 505 VFDAIICDPPYXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLF 326
           VFDAIICDPPY                G V+PYTVPD+KR +HIPSTA YSL EC+HDL 
Sbjct: 300 VFDAIICDPPYGVRAGGRKSGGRKLLKGAVEPYTVPDEKRTNHIPSTAAYSLVECVHDLL 359

Query: 325 ELAARMLVMGGRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKK 146
           +LAA+MLVMGGRLV+FYPVLREDG  + HFPEHPCF L+++ EQILS RYSR+LLTMVK 
Sbjct: 360 DLAAKMLVMGGRLVYFYPVLREDGFAENHFPEHPCFKLISSSEQILSSRYSRVLLTMVKT 419

Query: 145 GPYSEEIAEAAVKMHLDFRENHLKWLEDGKLHSA 44
           GPY+EEIAEAA + H++F+ENH+KWLEDG LHSA
Sbjct: 420 GPYTEEIAEAAREKHIEFKENHVKWLEDGNLHSA 453


>ref|NP_566792.1| methyltransferase / nucleic acid binding protein [Arabidopsis
           thaliana] gi|13430750|gb|AAK25997.1|AF360287_1 unknown
           protein [Arabidopsis thaliana]
           gi|9294300|dbj|BAB02202.1| unnamed protein product
           [Arabidopsis thaliana] gi|15293219|gb|AAK93720.1|
           unknown protein [Arabidopsis thaliana]
           gi|332643633|gb|AEE77154.1| methyltransferase / nucleic
           acid binding protein [Arabidopsis thaliana]
          Length = 477

 Score =  218 bits (554), Expect = 7e-55
 Identities = 105/154 (68%), Positives = 117/154 (75%)
 Frame = -2

Query: 505 VFDAIICDPPYXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLF 326
           +FDAIICDPPY                GTVDPYTVPDDKR DHIPST  YSL EC+HDL 
Sbjct: 295 IFDAIICDPPYGVRAGGRKSGGRKILRGTVDPYTVPDDKRTDHIPSTGAYSLVECVHDLL 354

Query: 325 ELAARMLVMGGRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKK 146
            LAARMLVM GRLVFF+PVLR++  ++  FPEHPCF LVA  EQILS RYSR+LLTMVK 
Sbjct: 355 HLAARMLVMKGRLVFFFPVLRDETGSEVKFPEHPCFKLVAVSEQILSSRYSRVLLTMVKV 414

Query: 145 GPYSEEIAEAAVKMHLDFRENHLKWLEDGKLHSA 44
            PYSEE+ EAA  MHL+FRENHLKWLEDG +HS+
Sbjct: 415 EPYSEEVEEAARLMHLEFRENHLKWLEDGNIHSS 448


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