BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013608
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]         286   9e-75
ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus s...   232   1e-58
gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]         213   9e-53
ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|38...   210   8e-52
gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]        192   1e-46

>gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]
          Length = 412

 Score =  286 bits (732), Expect = 9e-75
 Identities = 155/406 (38%), Positives = 223/406 (54%), Gaps = 13/406 (3%)
 Frame = -2

Query: 1286 DRIQQADDTIXXXXXXXXXPRMNTTDLERVAEFLFENSRIHTLRTHYDKYRRYVTLNSPQ 1107
            DR+   DD           P     DL R A++L +N RI   R  YDKYRRYV L S +
Sbjct: 3    DRVNAQDDDTVVPHQAPLQPAALQQDLTRSADYLLDNVRIGNHRQRYDKYRRYVLLRSSE 62

Query: 1106 IFDALVNLYSGVFLTQWQNYRRFHESFVIENAPRGWIYAARVYVSMWFIDLYVSNREAVK 927
            IF +LV +Y+ +F + WQ++RRF + F      +   + ARVY+S W  DLY S REA +
Sbjct: 63   IFTSLVAIYAHIFSSYWQHFRRFTDQFQAPTGVQLPTFVARVYISTWLHDLYCSIREATR 122

Query: 926  KLSSLAFNDRFSHELVSVSSEYDAFLALLNASIRPTHVKLAMEDALYIPVIAETL----S 759
             +S LAFN+R+S+EL+  S+EYD FLA L+ SI+PTH++   E+ L+IP++ E      +
Sbjct: 123  SISPLAFNERYSYELLPYSTEYDPFLAFLSMSIKPTHIQHTPENTLWIPILCENYDWDRN 182

Query: 758  TMTPDVFTIPHFNPHEEYFYGFTQLMKDRRSWKFQELSHDVLGRPCWLYDWHTDNKICSW 579
                + F I +F  +   FYG   ++K+R+ +K   L+ + +GRPCWL+DWH + ++C+W
Sbjct: 183  EANHNPFGITNFTLNSNLFYGLLAILKERKEFKLSTLTTNTIGRPCWLFDWHDNVQVCAW 242

Query: 578  FHMEGNFNLQDVALAYILGVACTPKLGPRDTDEWQFFDGQIPADTNPLLFERISPRRFFG 399
            F  E NFN QDV  AYI+GVACTPKLGP D D W+++       T      R++ RR +G
Sbjct: 243  FPREANFNSQDVTAAYIIGVACTPKLGPSDDDAWKYYASLNSVPTFTPTEPRLTNRRSYG 302

Query: 398  SYEVRTIEIDENYALPKS------STEAVASAXXXXXXXXXXXXXXXXKALTINE-PXXX 240
            +YEVRT E + NY LP S         A  +                  A+ I + P   
Sbjct: 303  AYEVRTRETENNYFLPDSLLNIIEDFTATGTTQRRKIRRPSATSASTGAAIIIRDTPGTA 362

Query: 239  XXXXXXXXXDEETIVP--RYRLEDWTYYYCLTLNMETHTRTGSLRM 108
                      E T  P  R ++ DW Y+  + L +E ++RT +LRM
Sbjct: 363  STATTSTTETEVTFPPVIRTKIRDWYYHSRVILELEDNSRTAALRM 408


>ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus sativus cryptic virus 3]
            gi|217039789|gb|ACJ76982.1| hypothetical protein
            [Raphanus sativus cryptic virus 3]
          Length = 374

 Score =  232 bits (592), Expect = 1e-58
 Identities = 116/300 (38%), Positives = 173/300 (57%), Gaps = 1/300 (0%)
 Frame = -2

Query: 1223 MNTTDLERVAEFLFENSRIHTLRTHYDKYRRYVTLNSPQIFDALVNLYSGVFLTQWQNYR 1044
            ++ + L R  E+L++  +I   R    KYRRY+ L   +I+  L+++Y   F   W ++R
Sbjct: 26   LDASKLNRATEYLYDADKIRPHRARSPKYRRYMQLKKNEIYVQLIDIYRASFSVTWPDFR 85

Query: 1043 RFHESFVIENAPRGWIYAARVYVSMWFIDLYVSNREAVKKLSSLAFNDRFSHELVSVSSE 864
                +F          Y A  Y+S WF DLY   R+A+K LS LA  + +   +  +S E
Sbjct: 86   HLIHAFPPPANHEPQTYYACCYISGWFRDLYYHIRKALKSLSGLAELEYYRDPIPQMSFE 145

Query: 863  YDAFLALLNASIRPTHVKLAMEDALYIPVIAETLSTMTPDVFTIPHFNPHEEYFYGFTQL 684
            YD FLALL A+IRPTH+    ED +Y+P+I+E       + F I ++    E F      
Sbjct: 146  YDNFLALLGAAIRPTHIVGNPEDVMYVPLISEATDVNQVNPFGINNYVHQPELFSAIVAT 205

Query: 683  MKDRRSWKFQELSHDVLGRPCWLYDWHTDNKICSWFHMEGNFNLQDVALAYILGVACTPK 504
            MKDR+ +    L  +  GRP WL+DWH +++IC+ F  EGNFN +D+A+A++LG ACT  
Sbjct: 206  MKDRKKFNMVPLPSNYSGRPSWLFDWHAEDQICAPFQPEGNFNNEDIAMAFVLGTACTSL 265

Query: 503  LGPRDTDEWQFF-DGQIPADTNPLLFERISPRRFFGSYEVRTIEIDENYALPKSSTEAVA 327
            +G RD D+WQF+ +  +PA  NP   +RI+PR  +GSYEVR+ E D +Y +P +S    A
Sbjct: 266  IGMRDRDDWQFYPNANVPAHFNPHTAQRITPRTMYGSYEVRSYETDHDYYIPSNSAGVTA 325


>gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]
          Length = 430

 Score =  213 bits (542), Expect = 9e-53
 Identities = 132/392 (33%), Positives = 195/392 (49%), Gaps = 24/392 (6%)
 Frame = -2

Query: 1214 TDLERVAEFLFENSRIHTLRTHYDKYRRYVTLNSPQIFDALVNLYSGVFLTQWQNYRRFH 1035
            +++ R+A++L ++  I  +R    K+RRY  L +  +F+ L+ +Y  +F   W+  RR  
Sbjct: 37   SEISRIADYLADDYEIGYVRDRPPKHRRYAVLRTQALFNKLIEIYGKLFKQNWEFLRRSI 96

Query: 1034 ESFV--IENAPRGWIYAARVYVSMWFIDLYVSNREAVKKLSSLAFNDRFSHELVSVSSEY 861
            + F   +    R W  AA  Y+S WF DLYVS R AV+K+S  AF   +      +  EY
Sbjct: 97   DGFTTAVGIRERQWENAAHAYISCWFFDLYVSVRNAVEKVSGTAFTQYYHAHAAHILHEY 156

Query: 860  DAFLALLNASIRPTHVKLAMEDALYIPVIAETLSTMTPDVF--TIPHFNPHEEYFYGFTQ 687
            DA L  LNA IRPTH+KLA+ED +YIP IA  ++   P+ F  T   ++   ++ Y    
Sbjct: 157  DALLVHLNAIIRPTHIKLALEDCIYIPRIATNMNITNPNPFGLTEATWDRDADFAYSIMD 216

Query: 686  LMKDRRS-WKFQELSHDVLGRPCWLYDWH---TDNKICSWFHMEGNFNLQDVALAYILGV 519
             MK   S W+ + L  D LGRP WL DWH      +  +WF  EGN++++D+   +I+G 
Sbjct: 217  RMKAPGSRWRVEPLVTDTLGRPGWLLDWHQVGAQQQAYAWFPSEGNYSMEDLIAPHIIGE 276

Query: 518  ACTPKLGPRDTDEWQFFDGQI-PADTNPLLFERISPRRFFGSYEVRTI------------ 378
            A TP +GP D D+WQ+F   I PA+      ER+S RRF GS EVRT             
Sbjct: 277  ALTPLMGPCDIDDWQYFPNFIRPANVPWQNMERVSARRFRGSAEVRTYAEEKVNLTRFTS 336

Query: 377  ---EIDENYALPKSSTEAVASAXXXXXXXXXXXXXXXXKALTINEPXXXXXXXXXXXXDE 207
               E  +  + P SST   +S                   +T+++              E
Sbjct: 337  TGHETSKKRSKP-SSTTTTSSQGGSRDMETEDEPREVVTDITLSQVTSTQQLQTLMTTGE 395

Query: 206  ETIVPRYRLEDWTYYYCLTLNMETHTRTGSLR 111
                 R+R+ D+TYY C+ L      R G++R
Sbjct: 396  ---ADRFRIIDYTYYCCVILRNTAQKRDGAIR 424


>ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|388877113|emb|CCH50610.1|
            coat protein [Persimmon cryptic virus]
          Length = 415

 Score =  210 bits (534), Expect = 8e-52
 Identities = 117/287 (40%), Positives = 162/287 (56%), Gaps = 6/287 (2%)
 Frame = -2

Query: 1220 NTTDLERVAEFLFENSRIHTLRTHYDKYRRYVTLNSPQIFDALVNLYSGVFLTQWQNYRR 1041
            N  +  R+A+ L +  +I   R +   +RRYV L S ++ D L NLY+  F   ++ ++ 
Sbjct: 39   NKPEYARIADSLEDEYQIGFQRINPRLHRRYVILRSQELHDRLCNLYAPYFQAGYRVFKH 98

Query: 1040 FHESFVIENAPRGWI----YAARVYVSMWFIDLYVSNREAVKKLSSLAFNDRFSHELVSV 873
              E++ +   P G+     YA   YVS W  DLYVS RE+VKKLS  AF  ++  E    
Sbjct: 99   VIEAYPL---PAGYASQIAYATACYVSSWCWDLYVSIRESVKKLSQTAFLQQYQTEQFHS 155

Query: 872  SSEYDAFLALLNASIRPTHVKLAMEDALYIPVIAETLSTMTPDVFTIPHFNPHEEYFYGF 693
               YD FL  LN  IRPTH+   +ED+LYIP+IA  +       F I H+  +E    G 
Sbjct: 156  QDRYDPFLQHLNTVIRPTHIPGGLEDSLYIPLIANHVQWGNQSPFGINHYAINESLVQGL 215

Query: 692  TQLMK-DRRSWKFQELSHDVLGRPCWLYDWHTDNKICSWFHMEGNFNLQDVALAYILGVA 516
              +M     +W+   LSHD LGRP WL DW   N+  +WF  E +F+ +D+  A+ILG+ 
Sbjct: 216  LDVMDLKNNTWRTVPLSHDTLGRPMWLLDWR-QNQAYAWFPQENHFSKEDLIAAHILGIP 274

Query: 515  CTPKLGPRDTDEWQFFDGQI-PADTNPLLFERISPRRFFGSYEVRTI 378
            C+P+LGPRD D+WQFF G + P   N   +ER  PRRFFG+ E RTI
Sbjct: 275  CSPRLGPRDVDDWQFFPGNVMPQHINIAAYERAIPRRFFGAAEYRTI 321


>gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]
          Length = 324

 Score =  192 bits (489), Expect = 1e-46
 Identities = 104/265 (39%), Positives = 152/265 (57%), Gaps = 8/265 (3%)
 Frame = -2

Query: 1139 YRRYVTLNSPQIFDALVNLYSGVFLTQWQNYRRFHESFVIENAPRGWI----YAARVYVS 972
            YRRY  L S ++   LV +Y+ +F T W +++    +   +  P G+     + A  Y+S
Sbjct: 17   YRRYANLRSNELHARLVQIYANLFTTYWAHFKH---ACPTDALPGGYTDRIQFVATNYIS 73

Query: 971  MWFIDLYVSNREAVKKLSSLAFNDRFSHELVSVSSEYDAFLALLNASIRPTHVKLAMEDA 792
             WF DL+VS R +V ++S  AFN  F +E+  V+  YD FL  LN  I+PTH++ ++ED 
Sbjct: 74   AWFWDLHVSIRNSVARISGTAFNQYFQNEVTHVAERYDPFLQHLNNVIKPTHIQNSLEDT 133

Query: 791  LYIPVIAET--LSTMTPDVFTIPHFNPHEEYFYGFTQLM-KDRRSWKFQELSHDVLGRPC 621
            LYIP+++ T  L     ++F + +F   E        +M   R  W    LS + LGRP 
Sbjct: 134  LYIPLVSTTINLEAENMNIFGMNNFYLDENIVLAILNIMDAPRNDWNTVPLSTNTLGRPG 193

Query: 620  WLYDWHTDNKICSWFHMEGNFNLQDVALAYILGVACTPKLGPRDTDEWQFF-DGQIPADT 444
            WL+D+    K  SWF ME NF+  D+   +ILG+ CTP+LGPRD D+WQFF  G +P   
Sbjct: 194  WLFDYRL-GKAYSWFPMESNFSRVDLIAPHILGIPCTPRLGPRDVDDWQFFPGGALPPRV 252

Query: 443  NPLLFERISPRRFFGSYEVRTIEID 369
            N   + R++ RRF+GS E RT+E D
Sbjct: 253  NINNYRRVTERRFYGSAEYRTLETD 277