BLASTX nr result

ID: Coptis21_contig00013605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013605
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72742.1| hypothetical protein VITISV_042733 [Vitis vinifera]   128   5e-30
ref|XP_002272089.1| PREDICTED: probable WRKY transcription facto...   128   2e-29
ref|XP_003617423.1| WRKY transcription factor [Medicago truncatu...   130   4e-28
ref|XP_003532648.1| PREDICTED: probable WRKY transcription facto...   127   3e-27
ref|XP_002283603.1| PREDICTED: probable WRKY transcription facto...   124   2e-26

>emb|CAN72742.1| hypothetical protein VITISV_042733 [Vitis vinifera]
          Length = 339

 Score =  128 bits (322), Expect(2) = 5e-30
 Identities = 72/156 (46%), Positives = 81/156 (51%)
 Frame = +2

Query: 293 GFDPMNMSFTDYLQGSVDYGALERALDLSRSSSEVFSSIDGTGQNTGGAIETVGSGXXXX 472
           GFDP  MSFTD L GS+DY +L  A  LS SSSE FS ++G  +      +   SG    
Sbjct: 72  GFDPPYMSFTDCLNGSLDYNSLTTAFGLSPSSSEAFSPVEGNHKPVANLGDLGASGEIAG 131

Query: 473 XXXXXXXXXXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXXAF 652
                               KSKK+RQ K    DG                       AF
Sbjct: 132 TPNSSISSSSTEAGAEEDSSKSKKDRQAKVSELDGGDGSKKVNKPKKKAEKRQREPRFAF 191

Query: 653 MTESEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 760
           MT+SEVDHLEDGYRWRKYGQKAVKNSP+PRSYYRCT
Sbjct: 192 MTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCT 227



 Score = 28.9 bits (63), Expect(2) = 5e-30
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 99  SMSDYRARDLYSLNIYHEDQSGITGTSTFPMS 194
           SMSD   RDLY  + +H+D+ GI G + F  S
Sbjct: 20  SMSD-EPRDLYYHDPFHDDRHGIIGNTGFSFS 50


>ref|XP_002272089.1| PREDICTED: probable WRKY transcription factor 28 [Vitis vinifera]
           gi|297740645|emb|CBI30827.3| unnamed protein product
           [Vitis vinifera]
          Length = 319

 Score =  128 bits (322), Expect(2) = 2e-29
 Identities = 72/156 (46%), Positives = 81/156 (51%)
 Frame = +2

Query: 293 GFDPMNMSFTDYLQGSVDYGALERALDLSRSSSEVFSSIDGTGQNTGGAIETVGSGXXXX 472
           GFDP  MSFTD L GS+DY +L  A  LS SSSE FS ++G  +      +   SG    
Sbjct: 52  GFDPPYMSFTDCLNGSLDYNSLTTAFGLSPSSSEAFSPVEGNHKPVANLGDLGASGEIAG 111

Query: 473 XXXXXXXXXXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXXAF 652
                               KSKK+RQ K    DG                       AF
Sbjct: 112 TPNSSISSSSTEAGAEEDSSKSKKDRQAKVSELDGGDGSKKVNKPKKKAEKRQREPRFAF 171

Query: 653 MTESEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 760
           MT+SEVDHLEDGYRWRKYGQKAVKNSP+PRSYYRCT
Sbjct: 172 MTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCT 207



 Score = 27.3 bits (59), Expect(2) = 2e-29
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 102 MSDYRARDLYSLNIYHEDQSGITGTSTFPMS 194
           MSD   RDLY  + +H+D+ GI G + F  S
Sbjct: 1   MSD-EPRDLYYHDPFHDDRHGIIGNTGFSFS 30


>ref|XP_003617423.1| WRKY transcription factor [Medicago truncatula]
           gi|355518758|gb|AET00382.1| WRKY transcription factor
           [Medicago truncatula]
          Length = 310

 Score =  130 bits (326), Expect = 4e-28
 Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
 Frame = +2

Query: 293 GFDPMN--MSFTDYLQGSVDYGALERALDLSRSSSEVFSSIDGTGQNTGGAIETVGSGXX 466
           GFDP +   SF+DYL GS+DY  L +A DLS SSSEV SSID        A + + S   
Sbjct: 27  GFDPSSHSTSFSDYLHGSMDYNTLSKAFDLSCSSSEVISSIDDNNTKKSSAGD-LSSLVG 85

Query: 467 XXXXXXXXXXXXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXX 646
                                  +KK++Q K GCEDG+                      
Sbjct: 86  ISETPKSSESSSSNEAVIEEDSTNKKDKQPKLGCEDGDDEKSKKENKAKKKEKKVKEPRF 145

Query: 647 AFMTESEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 760
           AF+T+SE+DHLEDGYRWRKYGQKAVKNSPYPRSYYRCT
Sbjct: 146 AFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 183


>ref|XP_003532648.1| PREDICTED: probable WRKY transcription factor 28-like [Glycine max]
          Length = 371

 Score =  127 bits (319), Expect = 3e-27
 Identities = 76/161 (47%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
 Frame = +2

Query: 296 FDPMNMSFTDYLQGSVDYGALERALDLSRSSSEVFSSIDGT------GQNTGGAIETVGS 457
           FDP  MSFTD LQGS+DY +L  +  LS SSSEVFSS++G       G + GG     G 
Sbjct: 58  FDPSYMSFTDCLQGSMDYNSLATSFGLSPSSSEVFSSVEGNQKPAEGGGDGGGGGGGSGG 117

Query: 458 GXXXXXXXXXXXXXXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXX 637
                                    KSKK RQ K   E+G                    
Sbjct: 118 SETLATLNSSISSSSSEAGAEEDSGKSKKERQVKT--EEGGENSKKGNKEKKKGEKKQKE 175

Query: 638 XXXAFMTESEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 760
              AFMT+SEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT
Sbjct: 176 PRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 216


>ref|XP_002283603.1| PREDICTED: probable WRKY transcription factor 28 [Vitis vinifera]
           gi|302143547|emb|CBI22108.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  124 bits (311), Expect = 2e-26
 Identities = 75/167 (44%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
 Frame = +2

Query: 290 HGFDPMNMSFTDYLQGSVDYGALERALDLSRSSSEVFSSID-----GTGQN----TGGAI 442
           H  DP  M+FTDYL GS+DY  L +A D+S SSSEV S +D     GT  +    T  ++
Sbjct: 49  HATDPSYMTFTDYLHGSLDYNTLSKAFDMSCSSSEVISPVDNDSGKGTASHEHPSTPNSL 108

Query: 443 ETVGSGXXXXXXXXXXXXXXXXXXXXXXXXKSK-KNRQQKAGCEDGNXXXXXXXXXXXXX 619
           +T  S                         KSK K   Q  GCEDG+             
Sbjct: 109 DTSSS----------------TEAITEDSGKSKHKPDLQGGGCEDGDENSKKANKSKKKG 152

Query: 620 XXXXXXXXXAFMTESEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 760
                    AFMT+SE+DHLEDGYRWRKYGQKAVKNSPYPRSYYRCT
Sbjct: 153 EKRPKEPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT 199


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