BLASTX nr result

ID: Coptis21_contig00013594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013594
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240...   143   3e-32
emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]   139   5e-31
ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana] ...   110   3e-22
gb|AAK68828.1| Unknown protein [Arabidopsis thaliana]                 110   3e-22
ref|XP_002887649.1| hypothetical protein ARALYDRAFT_476818 [Arab...   104   2e-20

>ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240987 [Vitis vinifera]
           gi|297745627|emb|CBI40792.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score =  143 bits (361), Expect = 3e-32
 Identities = 89/191 (46%), Positives = 116/191 (60%), Gaps = 7/191 (3%)
 Frame = -3

Query: 725 MGSCFST-----SSVPLLTAKVITLNGSLLEYSVSVTVSQVLKSETTQS-CFLCNSDRLY 564
           MG C S+     +S    TAK+I+L+G L EYS  VTVSQVL  E++ S CF+CNSD LY
Sbjct: 1   MGGCVSSVGSYSNSTSTATAKLISLHGELREYSAPVTVSQVLHFESSSSSCFVCNSDSLY 60

Query: 563 YNEFIQALNPSEELQMGQIYFILSTTRLQYRLTAQDM-XXXXXXXXXXXXXXXXXXXXXX 387
           Y+++I A+N  +EL  GQIYF+LS T+LQYRLTA +M                       
Sbjct: 61  YDDYIPAMNADDELLPGQIYFLLSATKLQYRLTASEMAALAVKASIALQNHSKKAGHRRN 120

Query: 386 XXXXXAPVMEVNQRVNEERFDGVKRFDQKLXXXXXXXXXXXRKLQRSASKRAKMAIRSFR 207
                +PV+EVNQ+V E    GVK+  +K            RKLQR +S+RA+MA+RSFR
Sbjct: 121 NKSRISPVLEVNQKVMEAEVGGVKKSFEK-PALGVSRHGSLRKLQRHSSRRARMAVRSFR 179

Query: 206 LRLSTIHEGSV 174
           LRL+TI+EGSV
Sbjct: 180 LRLTTIYEGSV 190


>emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]
          Length = 191

 Score =  139 bits (351), Expect = 5e-31
 Identities = 87/191 (45%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
 Frame = -3

Query: 725 MGSCFST-----SSVPLLTAKVITLNGSLLEYSVSVTVSQVLKSETTQS-CFLCNSDRLY 564
           MG C S+     +S    TAK+I+L+G L EYS  VTVSQVL  E++ S CF+CNSD LY
Sbjct: 1   MGGCVSSVGSYSNSTSTATAKLISLHGELREYSAPVTVSQVLHFESSSSSCFVCNSDSLY 60

Query: 563 YNEFIQALNPSEELQMGQIYFILSTTRLQYRLTAQDM-XXXXXXXXXXXXXXXXXXXXXX 387
           Y+++I A+N  +EL  GQIYF+LS  +LQYRL+A +M                       
Sbjct: 61  YDDYIPAMNADDELLPGQIYFLLSAXKLQYRLSASEMAALAVKASIALQNHSKKAGHRRN 120

Query: 386 XXXXXAPVMEVNQRVNEERFDGVKRFDQKLXXXXXXXXXXXRKLQRSASKRAKMAIRSFR 207
                +PV+EVNQ+V E    GVK+  +K            RKLQR +S+RA+MA+RSFR
Sbjct: 121 NKSRISPVLEVNQKVMEAEVGGVKKSFEK-PALGVSRHGSVRKLQRHSSRRARMAVRSFR 179

Query: 206 LRLSTIHEGSV 174
           LRL+TI+EGSV
Sbjct: 180 LRLTTIYEGSV 190


>ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12323985|gb|AAG51956.1|AC015450_17 unknown protein;
           83277-83927 [Arabidopsis thaliana]
           gi|21592540|gb|AAM64489.1| unknown [Arabidopsis
           thaliana] gi|23197634|gb|AAN15344.1| Unknown protein
           [Arabidopsis thaliana] gi|332197742|gb|AEE35863.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 216

 Score =  110 bits (275), Expect = 3e-22
 Identities = 80/214 (37%), Positives = 102/214 (47%), Gaps = 31/214 (14%)
 Frame = -3

Query: 725 MGSCFSTSSVPLL----TAKVITLNGSLLEYSVSVTVSQVLKSETTQSC--------FLC 582
           MG C S +    +    TAK++T+NG L EY V V  SQVL+SE+T S         FLC
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 581 NSDRLYYNEFIQALNPSEELQMGQIYFILSTTRLQYRLTAQDMXXXXXXXXXXXXXXXXX 402
           NSD LYY++FI A+   E LQ  QIYF+L  ++ QYRL+A DM                 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

Query: 401 XXXXXXXXXXAPVMEVNQRVNEERFDGV-------------------KRFDQKLXXXXXX 279
                     +PV+ +NQ  N+ R   V                    R           
Sbjct: 121 KNRRRRSGRISPVVTLNQ-ANDNRIAAVNNRIGGEATNMMMQKGKLPNRTTPFKDTNGYS 179

Query: 278 XXXXXRKLQRSASKRAKMAIRSFRLRLSTIHEGS 177
                RKL+R  S RAK+A+RSFRLRLSTI+EGS
Sbjct: 180 RSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 213


>gb|AAK68828.1| Unknown protein [Arabidopsis thaliana]
          Length = 216

 Score =  110 bits (275), Expect = 3e-22
 Identities = 81/214 (37%), Positives = 103/214 (48%), Gaps = 31/214 (14%)
 Frame = -3

Query: 725 MGSCFSTSSVPLL----TAKVITLNGSLLEYSVSVTVSQVLKSETTQSC--------FLC 582
           MG C S +    +    TAK++T+NG L EY V V  SQVL+SE+T S         FLC
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 581 NSDRLYYNEFIQALNPSEELQMGQIYFILSTTRLQYRLTAQDMXXXXXXXXXXXXXXXXX 402
           NSD LYY++FI A+   E LQ  QIYF+L  ++ QYRL+A DM                 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVXASVAIEKAAGK 120

Query: 401 XXXXXXXXXXAPVMEVNQRVNEERFDGV-------------------KRFDQKLXXXXXX 279
                     +PV+ +NQ  N+ R   V                    R           
Sbjct: 121 KNRRRRSGRISPVVTLNQ-ANDNRIAAVNNRIGGEATNMMMQKGKLPNRTTPFKDTNGYS 179

Query: 278 XXXXXRKLQRSASKRAKMAIRSFRLRLSTIHEGS 177
                RKL+R  S RAK+A+RSFRLRLSTI+EGS
Sbjct: 180 RSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 213


>ref|XP_002887649.1| hypothetical protein ARALYDRAFT_476818 [Arabidopsis lyrata subsp.
           lyrata] gi|297333490|gb|EFH63908.1| hypothetical protein
           ARALYDRAFT_476818 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  104 bits (259), Expect = 2e-20
 Identities = 82/215 (38%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
 Frame = -3

Query: 725 MGSCFSTS-----SVPLLTAKVITLNGSLLEYSVSVTVSQVLKSETTQSC---------- 591
           MG C S +     S P  TAK++T+NG L EY V V  SQVL+SE+T S           
Sbjct: 1   MGLCVSVNRNEYDSSPS-TAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSRSSSY 59

Query: 590 FLCNSDRLYYNEFIQALNPSEELQMGQIYFILSTTRLQYRLTAQDM-XXXXXXXXXXXXX 414
           FLCNSD LYY++FI A+   E LQ  QIYF+L  ++ QYRL+A DM              
Sbjct: 60  FLCNSDSLYYDDFIPAIESDEILQADQIYFVLPISKRQYRLSASDMAALAVKASVAIEKS 119

Query: 413 XXXXXXXXXXXXXXAPVMEVNQ------RVNEERFDGVKRFDQK----------LXXXXX 282
                         +PV+ +NQ           R  G     QK                
Sbjct: 120 AGKKNRRRRSSGRISPVVTLNQPNDNRIAAMNNRIGGEATILQKGKLPNRTTPFKDTTGY 179

Query: 281 XXXXXXRKLQRSASKRAKMAIRSFRLRLSTIHEGS 177
                 RKL+R  S RAK+A+RSFRLRLSTI+EGS
Sbjct: 180 SRSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 214


Top