BLASTX nr result

ID: Coptis21_contig00013590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013590
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611987.1| hypothetical protein MTR_5g020060 [Medicago ...   112   5e-23
ref|XP_002866738.1| hypothetical protein ARALYDRAFT_496922 [Arab...   110   2e-22
ref|NP_201479.1| uncharacterized protein [Arabidopsis thaliana] ...   107   1e-21
ref|XP_002521599.1| conserved hypothetical protein [Ricinus comm...   106   3e-21
dbj|BAJ85260.1| predicted protein [Hordeum vulgare subsp. vulgare]    101   1e-19

>ref|XP_003611987.1| hypothetical protein MTR_5g020060 [Medicago truncatula]
           gi|355513322|gb|AES94945.1| hypothetical protein
           MTR_5g020060 [Medicago truncatula]
          Length = 126

 Score =  112 bits (281), Expect = 5e-23
 Identities = 66/140 (47%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = +1

Query: 58  MLQALKVARCQPNILLNTQISS-IGRKTAVVQLPAQAKSVSTQSENQDKMSNAQNQSQKA 234
           ML  +K     P       +SS + R+T+ V+  ++A S         KM  AQ   QK+
Sbjct: 1   MLHTIKTVLTSPQTSFPRSLSSNLCRETSTVRFCSKADSAH-------KMDKAQ---QKS 50

Query: 235 NPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQHLPKHNEDHEVNVVHPHQPNH 414
           + + +    HGDVMSHSFGEGYATRS+EEGFGGIYG NQ L K    HE         NH
Sbjct: 51  SSEKKETTEHGDVMSHSFGEGYATRSDEEGFGGIYGGNQSLQKDKSVHE---------NH 101

Query: 415 PEYDRSQGSEVKEKEKGRNQ 474
           P+YD++QGSEVKEKEK R+Q
Sbjct: 102 PDYDKTQGSEVKEKEKARHQ 121


>ref|XP_002866738.1| hypothetical protein ARALYDRAFT_496922 [Arabidopsis lyrata subsp.
           lyrata] gi|297312573|gb|EFH42997.1| hypothetical protein
           ARALYDRAFT_496922 [Arabidopsis lyrata subsp. lyrata]
          Length = 121

 Score =  110 bits (275), Expect = 2e-22
 Identities = 67/141 (47%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
 Frame = +1

Query: 58  MLQALKVARCQPN--ILLNTQISSIGRKTAVVQLPAQAKSVSTQSENQDKMSNAQNQSQK 231
           M+ ALK  R  P+  +   +  S +GRK   V       S +T S++Q KM         
Sbjct: 1   MINALKSIRSLPSNTVYFFSPPSRLGRKVTGV-------SFATASDDQQKMDK------- 46

Query: 232 ANPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQHLPKHNEDHEVNVVHPHQPN 411
             P++ +EK  GDVMSHS+GEGYATR +EEGFGG YG NQ L K NE HE         N
Sbjct: 47  -KPENPNEKT-GDVMSHSYGEGYATRCDEEGFGGTYGGNQTLQKENEIHE---------N 95

Query: 412 HPEYDRSQGSEVKEKEKGRNQ 474
           HP+YD++QGSE KEKEK RNQ
Sbjct: 96  HPDYDKTQGSEAKEKEKARNQ 116


>ref|NP_201479.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758128|dbj|BAB08620.1| unnamed protein product
           [Arabidopsis thaliana] gi|15081694|gb|AAK82502.1|
           AT5g66780/MUD21_2 [Arabidopsis thaliana]
           gi|18252267|gb|AAL62014.1| AT5g66780/MUD21_2
           [Arabidopsis thaliana] gi|332010879|gb|AED98262.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 121

 Score =  107 bits (268), Expect = 1e-21
 Identities = 67/145 (46%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
 Frame = +1

Query: 58  MLQALKVARCQPNILLNTQIS------SIGRKTAVVQLPAQAKSVSTQSENQDKMSNAQN 219
           M+ A K  R  P+   NT +S       +GRK   V       S +T S+ Q      +N
Sbjct: 1   MINAFKTIRSLPS---NTTVSFCSTPSRLGRKVTGV-------SFATTSDQQKMDKKPEN 50

Query: 220 QSQKANPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQHLPKHNEDHEVNVVHP 399
            ++K           GDVMSHS+GEGYATRS+EEGFGGIYG NQ L K NE HE      
Sbjct: 51  PNEKT----------GDVMSHSYGEGYATRSDEEGFGGIYGGNQTLQKENEIHE------ 94

Query: 400 HQPNHPEYDRSQGSEVKEKEKGRNQ 474
              NHP+YD++QGSE KEKEK RNQ
Sbjct: 95  ---NHPDYDKTQGSESKEKEKARNQ 116


>ref|XP_002521599.1| conserved hypothetical protein [Ricinus communis]
           gi|223539277|gb|EEF40870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score =  106 bits (265), Expect = 3e-21
 Identities = 65/145 (44%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
 Frame = +1

Query: 58  MLQALKVARCQ----PNILLNTQISSIGRKTAVVQLPAQAKSVSTQSENQDKMSNAQNQS 225
           M QA+++ R Q     +I        I + T+ V    +  + S+  +N+  M  AQN +
Sbjct: 1   MNQAIRLIRTQNPSAASIFSFPSSRPINQGTSAVGF-RKVTTFSSNPDNKHDMEKAQNPN 59

Query: 226 QKANPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQHLPKHNEDHEVNVVHPHQ 405
           +K           GDVMSHSFGEGYATRS+EEGFGGIYG NQ + K   D E++      
Sbjct: 60  EKT----------GDVMSHSFGEGYATRSDEEGFGGIYGGNQSVVKEETDKEIH------ 103

Query: 406 PNHPEYDRSQGSEVKEKEKGRNQPN 480
            NHP YD SQGSEVKEKEK R+Q N
Sbjct: 104 ENHPAYDTSQGSEVKEKEKARHQTN 128


>dbj|BAJ85260.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score =  101 bits (252), Expect = 1e-19
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
 Frame = +1

Query: 94  NILLNTQISSIGRKTAV-------VQLPAQAKSVSTQSENQDKMSNAQNQSQKANPQSQS 252
           N++     + +GR+ +V         +P         ++ Q  +  AQ   Q+ N    +
Sbjct: 36  NLVAPATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQGNASEDT 95

Query: 253 EKV---HGDVMSHSFGEGYATRSEEEGFGGIYGDNQHLPKHNEDHEVNVVHPHQPNHPEY 423
            K    HGDVM+HSFGEGY+TRS+EEGFGG+YG N   P  N   E++      PNHPEY
Sbjct: 96  HKTTTAHGDVMTHSFGEGYSTRSDEEGFGGVYGQND--PVLNPGTEMH------PNHPEY 147

Query: 424 DRSQGSEVKEKEKGRNQPNEPTA 492
           D+SQGSEVKEKEK R+  ++  A
Sbjct: 148 DKSQGSEVKEKEKARHLKDDKHA 170


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