BLASTX nr result

ID: Coptis21_contig00013585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013585
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago ...    99   3e-19
ref|XP_003553082.1| PREDICTED: uncharacterized protein LOC100799...    95   5e-18
ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
emb|CAQ58595.1| unknown protein [Vitis vinifera]                       92   4e-17
ref|XP_003538382.1| PREDICTED: uncharacterized protein LOC100798...    91   1e-16

>ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago truncatula]
           gi|355518802|gb|AET00426.1| hypothetical protein
           MTR_5g091900 [Medicago truncatula]
           gi|388503112|gb|AFK39622.1| unknown [Medicago
           truncatula]
          Length = 232

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 VLERIVRAILSPGD-EKTSLFVRIKKSFYENLPLIPEASRNSTRKLLIWTRQGTALRALL 83
           VL R+   IL P   + TSL  RIK S  +N PLIPEASRNS   +L+WTR+G+ LRALL
Sbjct: 42  VLNRLASTILFPDPADGTSLLRRIKNSVADNAPLIPEASRNSANDVLVWTRRGSPLRALL 101

Query: 82  VISIGTIVLLALSGLLVFMVFFVAATV 2
           VIS+GT+  ++LSGLLVFM+FF+ ATV
Sbjct: 102 VISVGTVAFVSLSGLLVFMLFFLTATV 128


>ref|XP_003553082.1| PREDICTED: uncharacterized protein LOC100799172 [Glycine max]
          Length = 227

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = -2

Query: 259 VLERIVRAIL--SPGDEKTSLFVRIKKSFYENLPLIPEASRNSTRKLLIWTRQGTALRAL 86
           VL RI  AIL   P D   SL  RIK S  +N  L+PEASRNS R +LIWTR+GT  RAL
Sbjct: 37  VLNRIASAILFQEPADAG-SLLRRIKVSVADNATLLPEASRNSARDVLIWTRRGTPFRAL 95

Query: 85  LVISIGTIVLLALSGLLVFMVFFVAATV 2
            VIS+GT+  +AL+GLLVFM+FF+AATV
Sbjct: 96  FVISVGTVTFVALTGLLVFMLFFLAATV 123


>ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|222848860|gb|EEE86407.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
 Frame = -2

Query: 259 VLERIVRAILSPGD----EKTSLFVRIKKSFYENLPLIPEASRNSTRKLLIWTRQGTALR 92
           V+ R++  IL P        TSL  RIK    ENLPL+ E SRNS +KLL WT++G+ LR
Sbjct: 31  VIHRVIVMILYPDPGSSASSTSLLQRIKIVLSENLPLLGEGSRNSGKKLLQWTQRGSPLR 90

Query: 91  ALLVISIGTIVLLALSGLLVFMVFFVAAT 5
           ALLVIS+GTI LL+L+G+LVFM+FF+AAT
Sbjct: 91  ALLVISVGTIALLSLTGVLVFMLFFLAAT 119


>emb|CAQ58595.1| unknown protein [Vitis vinifera]
          Length = 220

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/86 (55%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -2

Query: 259 VLERIVRAILSPGDEKT-SLFVRIKKSFYENLPLIPEASRNSTRKLLIWTRQGTALRALL 83
           VL R++ AI  P    + SL  R+K S  +N+PL+ +AS+N+ R ++ WTR+G+ALRALL
Sbjct: 28  VLHRLMAAIFFPDPTSSASLLRRVKISVADNVPLLRQASKNTARNVMHWTRRGSALRALL 87

Query: 82  VISIGTIVLLALSGLLVFMVFFVAAT 5
            IS+GTI LLAL+GLLVFM+FF+AAT
Sbjct: 88  AISVGTITLLALTGLLVFMLFFLAAT 113


>ref|XP_003538382.1| PREDICTED: uncharacterized protein LOC100798498 [Glycine max]
          Length = 226

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 VLERIVRAILSPGDEKT-SLFVRIKKSFYENLPLIPEASRNSTRKLLIWTRQGTALRALL 83
           VL RI  AIL P    + SL  RIK S  ++ PL+PEAS+NS R +L+WTR+GT  R L 
Sbjct: 36  VLNRIASAILFPEPAYSGSLLRRIKLSVADHAPLLPEASKNSARDVLLWTRRGTPFRPLF 95

Query: 82  VISIGTIVLLALSGLLVFMVFFVAATV 2
           VIS+GT+  +AL+ LLVFM+FF+AAT+
Sbjct: 96  VISVGTVTFVALTALLVFMLFFLAATI 122