BLASTX nr result

ID: Coptis21_contig00013583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013583
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    72   4e-11
ref|XP_004165999.1| PREDICTED: uncharacterized LOC101217008, par...    72   6e-11
ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, par...    68   9e-10
gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thali...    67   1e-09
gb|AAD22702.1| putative TNP1-like transposon protein [Arabidopsi...    65   4e-09

>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQKF-ILDEGRRTYA 62
           GQP+ E S   SS+LG +  E+VP+T SDWR +  R K++ W S+  ++ + ++ +R   
Sbjct: 165 GQPIEEASIGLSSFLGALVREVVPVTLSDWRKLSTRSKEILWTSIQFRYNVKEDWQRKCI 224

Query: 61  LQQIGRLWRAHKSRLRGKIR 2
            Q++GRLWRA KSR+  +I+
Sbjct: 225 FQKMGRLWRAEKSRILSQIQ 244



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQKFILDEGRRTYAL 59
           GQP+GE S   SS+LG +  E+VP+T S+WR +    K++ W S+               
Sbjct: 474 GQPIGEASIGLSSFLGALVREVVPVTLSNWRKLSTTSKEILWTSI--------------- 518

Query: 58  QQIGRLWRAHKSRLRGKIR 2
            Q+GRLWRA KSR+  +I+
Sbjct: 519 -QMGRLWRAGKSRIVSQIQ 536



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQK 95
           GQP+GE S   SS+LG +  E+VP+T +DWR +  R K++ W+SV  K
Sbjct: 795 GQPIGEASIGLSSFLGALVREVVPVTLNDWRKLSTRSKEVLWKSVQAK 842


>ref|XP_004165999.1| PREDICTED: uncharacterized LOC101217008, partial [Cucumis sativus]
          Length = 308

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQKF-ILDEGRRTYA 62
           GQP+ E S   SS+LG +  E+VP+T SDWR +  R K++ W S+  ++ + ++ +R   
Sbjct: 165 GQPIEEASIGLSSFLGPLVREVVPVTLSDWRKLSTRSKEILWTSIQFRYNVKEDWQRKCI 224

Query: 61  LQQIGRLWRAHKSRLRGKIR 2
            Q++GRLWRA KSR   +I+
Sbjct: 225 FQKMGRLWRAEKSRFLSQIQ 244


>ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, partial [Cucumis sativus]
          Length = 345

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQKFILDE-GRRTYA 62
           GQP+GE S   SS+LG +  E+VP+T S+WR +    K++ W S+  ++ + E  +R   
Sbjct: 165 GQPIGEASIGLSSFLGALVREVVPVTLSNWRKLSTTSKEILWTSIQLRYNVKEVWQRKCI 224

Query: 61  LQQIGRLWRAHKSRLRGKIR 2
            +++GRLWRA KSR+  +I+
Sbjct: 225 FRKMGRLWRAGKSRIVSQIQ 244


>gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 781

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQKFILDEG-RRTYA 62
           G PVG  S + +SY+G +  E VP+T   W+ +    K + W+SV  +F LDE  +R   
Sbjct: 266 GDPVGPGSVKLASYVGTLVREHVPITIETWKDVSQDMKTVLWKSVQARFELDEEFQRVAV 325

Query: 61  LQQIGRLWRAHKSR 20
           L+Q+G LWR++KSR
Sbjct: 326 LKQMGSLWRSYKSR 339


>gb|AAD22702.1| putative TNP1-like transposon protein [Arabidopsis thaliana]
          Length = 531

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -1

Query: 238 GQPVGENSAQFSSYLGNIASEMVPLTFSDWRAIKNRYKDLYWQSVLQKFILDEG-RRTYA 62
           G+ +G  S + SSY+G +  E VP+   +W+ +    K + W+S+  +F LDE  +R   
Sbjct: 20  GEAIGPGSVKLSSYVGTLMREHVPINIVNWKKVTRDLKTVLWKSIQARFELDEDWQRISV 79

Query: 61  LQQIGRLWRAHKSR 20
           + Q+G LWRAHKSR
Sbjct: 80  INQMGNLWRAHKSR 93


Top