BLASTX nr result

ID: Coptis21_contig00013552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013552
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267...   150   4e-34
ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266...   139   1e-30
ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209...   136   6e-30
emb|CBI27887.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_002514131.1| conserved hypothetical protein [Ricinus comm...   132   2e-28

>ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267009 [Vitis vinifera]
          Length = 117

 Score =  150 bits (379), Expect = 4e-34
 Identities = 76/116 (65%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = +3

Query: 117 MEDFRSKSCGGDKMQIESYTGERPTSHGMHDFRSYSTSYASS-MPQVQMDDREMKFXXXX 293
           MED+RSKSC   +MQIESY G RP   GMHD RSYS SYASS  P  QM           
Sbjct: 1   MEDYRSKSCREGRMQIESYYGGRPAPSGMHDLRSYSVSYASSSQPPTQMGKEVKIKKGKS 60

Query: 294 XXXXXXXNWSFNDPEIQRKKRVASYKVYAVEGKMKGSVRKSFRWLKDRYTQAVYGW 461
                  +WSFNDPE+QRKKRVASYKVYAVEGKMKGS RKSFRW+KD YTQ VYGW
Sbjct: 61  SFGPSSKSWSFNDPELQRKKRVASYKVYAVEGKMKGSFRKSFRWIKDTYTQVVYGW 116


>ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266443 [Vitis vinifera]
          Length = 116

 Score =  139 bits (349), Expect = 1e-30
 Identities = 72/117 (61%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
 Frame = +3

Query: 117 MEDFRSKSCGGDKMQIESYTGER--PTSHGMHDFRSYSTSYASSMPQVQMDDREMKFXXX 290
           MEDFRSKSCG  +MQ+ESY G    PTS GM D R YS SYA   PQ QM +        
Sbjct: 1   MEDFRSKSCGDGRMQMESYHGGGGGPTSTGMQDLRCYSASYAYP-PQAQMGNDPKFKKGK 59

Query: 291 XXXXXXXXNWSFNDPEIQRKKRVASYKVYAVEGKMKGSVRKSFRWLKDRYTQAVYGW 461
                    WSF+DPE+QRKKRVASYKVYAVEGKMKGS++KSFRWLKDRYT+ ++GW
Sbjct: 60  STNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVIHGW 116


>ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209615 [Cucumis sativus]
           gi|449480704|ref|XP_004155972.1| PREDICTED:
           uncharacterized LOC101209615 [Cucumis sativus]
          Length = 116

 Score =  136 bits (343), Expect = 6e-30
 Identities = 68/116 (58%), Positives = 77/116 (66%)
 Frame = +3

Query: 117 MEDFRSKSCGGDKMQIESYTGERPTSHGMHDFRSYSTSYASSMPQVQMDDREMKFXXXXX 296
           MEDFRSKSC  ++MQIE Y   R     M D RSYS SYASS+ Q Q +           
Sbjct: 1   MEDFRSKSCREERMQIERYNENRIAPTNMQDLRSYSVSYASSVQQNQSNKEVKMKKGKSN 60

Query: 297 XXXXXXNWSFNDPEIQRKKRVASYKVYAVEGKMKGSVRKSFRWLKDRYTQAVYGWR 464
                 +WSF DPE+QRK RVA YKVYAVEGKMKGS+RKSFRW+K+ YTQ VYGWR
Sbjct: 61  MGSTSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQVVYGWR 116


>emb|CBI27887.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  134 bits (338), Expect = 2e-29
 Identities = 71/116 (61%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
 Frame = +3

Query: 117 MEDFRSKSCGGDKMQIESYTGER--PTSHGMHDFRSYSTSYASSMPQVQMDDREMKFXXX 290
           MEDFRSKSCG  +MQ+ESY G    PTS GM D R YS SYA   PQ QM +        
Sbjct: 1   MEDFRSKSCGDGRMQMESYHGGGGGPTSTGMQDLRCYSASYAYP-PQAQMGNDPKFKKGK 59

Query: 291 XXXXXXXXNWSFNDPEIQRKKRVASYKVYAVEGKMKGSVRKSFRWLKDRYTQAVYG 458
                    WSF+DPE+QRKKRVASYKVYAVEGKMKGS++KSFRWLKDRYT+ ++G
Sbjct: 60  STNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVIHG 115


>ref|XP_002514131.1| conserved hypothetical protein [Ricinus communis]
           gi|223546587|gb|EEF48085.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  132 bits (331), Expect = 2e-28
 Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
 Frame = +3

Query: 117 MEDFRSKSCGGDKMQIESYTGE---RPTS--HGMHDFRSYSTSYASSM--PQVQMDDREM 275
           MEDFRS SC   +MQI+SY G    R +S  + M D R YS SYASS+   Q QM + ++
Sbjct: 1   MEDFRSNSCNDGRMQIQSYHGPSSLRSSSGVNSMQDLRCYSASYASSVHPTQTQMGNNDV 60

Query: 276 KFXXXXXXXXXXX-NWSFNDPEIQRKKRVASYKVYAVEGKMKGSVRKSFRWLKDRYTQAV 452
           KF            +WSFNDPE+QRKKRVASYKVY VEGK+KGS +KSFRWLKDRYT+ V
Sbjct: 61  KFKKGKSTNGSVSKSWSFNDPELQRKKRVASYKVYTVEGKVKGSFKKSFRWLKDRYTRVV 120

Query: 453 YGW 461
           +GW
Sbjct: 121 HGW 123


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