BLASTX nr result

ID: Coptis21_contig00013548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013548
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530714.1| mutt/nudix hydrolase, putative [Ricinus comm...   338   2e-90
ref|XP_003625267.1| Nudix hydrolase [Medicago truncatula] gi|355...   330   3e-88
ref|XP_004136565.1| PREDICTED: nudix hydrolase 23, chloroplastic...   325   2e-86
ref|NP_565965.1| nudix hydrolase 23 [Arabidopsis thaliana] gi|68...   323   5e-86
ref|XP_002275478.1| PREDICTED: nudix hydrolase 23, chloroplastic...   322   1e-85

>ref|XP_002530714.1| mutt/nudix hydrolase, putative [Ricinus communis]
           gi|223529728|gb|EEF31668.1| mutt/nudix hydrolase,
           putative [Ricinus communis]
          Length = 296

 Score =  338 bits (867), Expect = 2e-90
 Identities = 157/212 (74%), Positives = 177/212 (83%)
 Frame = -2

Query: 917 RPHSQLKSEPVAQIKNISFCQWCGATTKQGIPDGDDKPRAICTSCGKVTYQNPKMVTGCL 738
           RP S   +   A ++NI FCQWCG   K  IP+G++K RAICT CGK+ YQNPKMV GCL
Sbjct: 85  RPPSSSVAVRSAHVRNIKFCQWCGGAAKHEIPEGEEKLRAICTVCGKIAYQNPKMVVGCL 144

Query: 737 VEHDGKVLLCKRKIPPSYGLWTLPAGYMEMGESAVEGATRETWEEAGAEVEILSPFAHLD 558
           +EHD KVLLCKR I PSYGLWTLPAGY+EMGESA EGA RETWEEAGAEVE++SPFAHLD
Sbjct: 145 IEHDNKVLLCKRNIQPSYGLWTLPAGYLEMGESAAEGAMRETWEEAGAEVEVVSPFAHLD 204

Query: 557 IPLIGQTYIIFRAKLKTPHFSPGPESLECRLFALDDIPFDSLAFSSMLVTLNLYTEDLKA 378
           IPLIGQTYIIF A+LK PHFSPG ESLEC+LF+LDDIPFDSLAFSSMLVTLNLY ED+KA
Sbjct: 205 IPLIGQTYIIFLARLKKPHFSPGAESLECQLFSLDDIPFDSLAFSSMLVTLNLYVEDVKA 264

Query: 377 GKPKFHHGTINKSAGTGPSDIHSFTLDDYFHC 282
           G+ KFH+G INK  GT PSDI +FT+D +F C
Sbjct: 265 GRLKFHYGIINKRPGTSPSDIRAFTVDYHFQC 296


>ref|XP_003625267.1| Nudix hydrolase [Medicago truncatula] gi|355500282|gb|AES81485.1|
           Nudix hydrolase [Medicago truncatula]
          Length = 267

 Score =  330 bits (847), Expect = 3e-88
 Identities = 155/226 (68%), Positives = 185/226 (81%)
 Frame = -2

Query: 962 LSSVSTNATTCFRSFRPHSQLKSEPVAQIKNISFCQWCGATTKQGIPDGDDKPRAICTSC 783
           L + +T  TT F  FR  S L+S     + +I FCQWCG +TK  IP+G++K RAICT C
Sbjct: 43  LPTHTTPRTTRFSPFRASSSLQSS--GNVLSIKFCQWCGGSTKHDIPEGEEKLRAICTLC 100

Query: 782 GKVTYQNPKMVTGCLVEHDGKVLLCKRKIPPSYGLWTLPAGYMEMGESAVEGATRETWEE 603
           G++ YQNPKMV GCL+EHD KVLLCKR I PSYGLWTLPAGY+E+GESA+EGA RET EE
Sbjct: 101 GRIAYQNPKMVVGCLIEHDSKVLLCKRNIQPSYGLWTLPAGYLEIGESAMEGAVRETREE 160

Query: 602 AGAEVEILSPFAHLDIPLIGQTYIIFRAKLKTPHFSPGPESLECRLFALDDIPFDSLAFS 423
           A A+VE++SPFA LDIPLIGQTY+IF AKLK PHFSPGPES EC+LF+LDDIPF+SL+FS
Sbjct: 161 ANADVEVISPFAQLDIPLIGQTYMIFLAKLKKPHFSPGPESSECQLFSLDDIPFNSLSFS 220

Query: 422 SMLVTLNLYTEDLKAGKPKFHHGTINKSAGTGPSDIHSFTLDDYFH 285
           SM+VTL+LY ED+KAGKPKFH+GTINK  GT PSD H++TLD + H
Sbjct: 221 SMVVTLSLYIEDMKAGKPKFHYGTINKRPGTSPSDSHAYTLDHHMH 266


>ref|XP_004136565.1| PREDICTED: nudix hydrolase 23, chloroplastic-like [Cucumis sativus]
           gi|449511340|ref|XP_004163930.1| PREDICTED: nudix
           hydrolase 23, chloroplastic-like [Cucumis sativus]
          Length = 306

 Score =  325 bits (832), Expect = 2e-86
 Identities = 152/206 (73%), Positives = 171/206 (83%)
 Frame = -2

Query: 914 PHSQLKSEPVAQIKNISFCQWCGATTKQGIPDGDDKPRAICTSCGKVTYQNPKMVTGCLV 735
           P S   +    +I+NI FCQWCG  TK GIP+G++K RAICT CGK+TYQNPKMV GCL+
Sbjct: 96  PASSTVTHSSEKIRNIRFCQWCGGQTKHGIPEGEEKLRAICTVCGKITYQNPKMVVGCLI 155

Query: 734 EHDGKVLLCKRKIPPSYGLWTLPAGYMEMGESAVEGATRETWEEAGAEVEILSPFAHLDI 555
            HD KVLLC+RKI PSYGLWTLPAGY+E+GESA +GA RET EEA AEVE+ SPFA LDI
Sbjct: 156 HHDNKVLLCRRKIEPSYGLWTLPAGYLEIGESAADGAIRETLEEANAEVEVTSPFAQLDI 215

Query: 554 PLIGQTYIIFRAKLKTPHFSPGPESLECRLFALDDIPFDSLAFSSMLVTLNLYTEDLKAG 375
           PLIGQTYIIF  KLK P+FSPGPESLECRLF LDDIPFDSLAFSSMLVTL LY ED+KAG
Sbjct: 216 PLIGQTYIIFMGKLKKPYFSPGPESLECRLFPLDDIPFDSLAFSSMLVTLRLYVEDVKAG 275

Query: 374 KPKFHHGTINKSAGTGPSDIHSFTLD 297
           +  FH+GTINK  GTG SDIH++TLD
Sbjct: 276 RATFHYGTINKRPGTGASDIHAYTLD 301


>ref|NP_565965.1| nudix hydrolase 23 [Arabidopsis thaliana]
           gi|68565870|sp|P93740.2|NUD23_ARATH RecName: Full=Nudix
           hydrolase 23, chloroplastic; Short=AtNUDT23; AltName:
           Full=ADP-ribose pyrophosphatase; AltName: Full=FAD
           diphosphatase; Flags: Precursor
           gi|20198322|gb|AAB63537.2| expressed protein
           [Arabidopsis thaliana] gi|62320524|dbj|BAD95098.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|107738412|gb|ABF83693.1| At2g42070 [Arabidopsis
           thaliana] gi|330254973|gb|AEC10067.1| nudix hydrolase 23
           [Arabidopsis thaliana]
          Length = 280

 Score =  323 bits (828), Expect = 5e-86
 Identities = 158/239 (66%), Positives = 186/239 (77%), Gaps = 16/239 (6%)
 Frame = -2

Query: 965 SLSSVSTNATTCFRSFRP----HSQLKSEPVAQ------------IKNISFCQWCGATTK 834
           +LSSV++++     SF+P     S   S+PVA             ++ I FCQWCG  TK
Sbjct: 37  NLSSVTSSSPRRIFSFKPTRMSSSLPGSDPVANSPTFVSVQSAGDVRKIKFCQWCGGPTK 96

Query: 833 QGIPDGDDKPRAICTSCGKVTYQNPKMVTGCLVEHDGKVLLCKRKIPPSYGLWTLPAGYM 654
             IPDG++K RAICT CGK+ YQNPKMV GCL+EH+GKVLLCKR I PS+GLWTLPAGY+
Sbjct: 97  HEIPDGEEKLRAICTHCGKIAYQNPKMVVGCLIEHEGKVLLCKRNIQPSHGLWTLPAGYL 156

Query: 653 EMGESAVEGATRETWEEAGAEVEILSPFAHLDIPLIGQTYIIFRAKLKTPHFSPGPESLE 474
           E+GESA +GA RETWEEAGA VE++SPFA LDIPLIGQTY+IF AKLK  HF+PGPESLE
Sbjct: 157 EVGESAAQGAMRETWEEAGATVEVISPFAQLDIPLIGQTYVIFLAKLKNLHFAPGPESLE 216

Query: 473 CRLFALDDIPFDSLAFSSMLVTLNLYTEDLKAGKPKFHHGTINKSAGTGPSDIHSFTLD 297
           CRLFALD+IPFDSLAFSS+ VTLNLY EDLK GK KFH+GTINK  G+ PSDI +F+LD
Sbjct: 217 CRLFALDEIPFDSLAFSSIYVTLNLYLEDLKKGKLKFHYGTINKRPGSSPSDIRAFSLD 275


>ref|XP_002275478.1| PREDICTED: nudix hydrolase 23, chloroplastic-like [Vitis vinifera]
          Length = 291

 Score =  322 bits (825), Expect = 1e-85
 Identities = 160/239 (66%), Positives = 183/239 (76%), Gaps = 18/239 (7%)
 Frame = -2

Query: 947 TNATTCFRSFRPHS-QLKSEPVAQIKN----------------ISFCQWCGATTKQGIPD 819
           T    CFR+FR  + + +S P A   +                I+FCQWCG  TK  IP+
Sbjct: 52  TRKMRCFRAFRASTIRAESNPDAPSSSSASSSASVQSTGSTLKINFCQWCGGPTKHDIPE 111

Query: 818 GDDKPRAICTSCGKVTYQNPKMVTGCLVEHDGKVLLCKRKIPPSYGLWTLPAGYMEMGES 639
           G++K RAICT CGK+TYQNPKMV GCL+ H+ KVLLC+RKI PSYG WTLPAGY+E+GES
Sbjct: 112 GEEKIRAICTLCGKITYQNPKMVVGCLIAHENKVLLCQRKIQPSYGRWTLPAGYLEIGES 171

Query: 638 AVEGATRETWEEAGAEVEILSPFAHLDIPLIGQTYIIFRAKLKTPHFSPGPESLECRLFA 459
           A EGA RETWEEAGA+VE+ SPFA LDIPLIGQTYIIF  KLK PHFSPGPESL+CRLFA
Sbjct: 172 AAEGAIRETWEEAGADVEVQSPFAQLDIPLIGQTYIIFLGKLKKPHFSPGPESLDCRLFA 231

Query: 458 LDDIPFDSLAFSSMLVTLNLYTEDLKA-GKPKFHHGTINKSAGTGPSDIHSFTLDDYFH 285
           LDDIPFDSLAFSSMLVTL LY ED+K+ G+PKFH+GTINK  GT PSDI S+TLD  FH
Sbjct: 232 LDDIPFDSLAFSSMLVTLKLYIEDVKSTGRPKFHYGTINKRPGTSPSDIQSYTLD--FH 288


Top