BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013534
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   220   2e-78
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   202   1e-71
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-71
ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm...   204   9e-70
ref|XP_002512603.1| conserved hypothetical protein [Ricinus comm...   194   1e-68

>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  220 bits (561), Expect(2) = 2e-78
 Identities = 114/208 (54%), Positives = 144/208 (69%), Gaps = 3/208 (1%)
 Frame = -3

Query: 747 SVNLDKKSGKKCFMIGAKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLDIKVEID 568
           S  L+K SGKKC+M+ A++LKI WSDTP YW+WI LPDSRF E AELI+VCWL+I   I+
Sbjct: 99  SFALEKWSGKKCYMLSARDLKIVWSDTPTYWRWICLPDSRFPEVAELISVCWLEISARIN 158

Query: 567 TQILSPTTTYAAYLVIKFSDQASGLEDPPAEASVKFLGGGGSASGERTVYLDPECNRRPH 388
             +LSP+T Y AY V K +  A G E  PAEA V   G  GS + +  VYLD E  RR  
Sbjct: 159 ISMLSPSTLYTAYFVFKSTTGAYGFEYQPAEAVV---GLVGSETCKHNVYLDAERGRRRR 215

Query: 387 IQYVPHRLGLIRRRFGHVLRPGLSSATR---SDGQFPSQRGDGWMEIELGEFYNEQGEDG 217
            Q V  R+GL+ R  G +   GL ++ R   SD ++P +RGDGW+EIELGEF+ ++GEDG
Sbjct: 216 SQIVRRRIGLLNR--GRIF--GLQASLRNGESDCKYPKERGDGWLEIELGEFFKKKGEDG 271

Query: 216 VVEMSLQEVKAGHWKAGLIVQGIEVRPK 133
            +E+S+ EVK GHWK GL VQGIE+RPK
Sbjct: 272 ELELSVLEVKGGHWKGGLAVQGIEIRPK 299



 Score =  100 bits (248), Expect(2) = 2e-78
 Identities = 44/82 (53%), Positives = 60/82 (73%)
 Frame = -2

Query: 1105 ILSLTSPRDTCTSSLVSSTFKSAADSDAIWEKFLPSDYKDIVSRSVEDLSTNKFASKKEL 926
            ++S T P D C  S VSSTF+ AA+SD +WEKFLP DY  I+SRS +    ++F+SKK+L
Sbjct: 23   VVSFTGPFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSDSFLLDRFSSKKQL 82

Query: 925  YFRLCGDPVLLDEGNKSVNLDK 860
            YF LC +P+L+D+G KS  L+K
Sbjct: 83   YFSLCDNPILIDDGKKSFALEK 104


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  202 bits (515), Expect(2) = 1e-71
 Identities = 107/211 (50%), Positives = 137/211 (64%), Gaps = 6/211 (2%)
 Frame = -3

Query: 747 SVNLDKKSGKKCFMIGAKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLDIKVEID 568
           S +L KKSGKKC+M+ A++L I W DTP YW+W     SRF E AELI VCWL+I  +I+
Sbjct: 90  SFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGVCWLEICGKIN 149

Query: 567 TQILSPTTTYAAYLVIKFSDQASGLEDPPAEASVKFLGGGGSASGERTVYLDPECNRRPH 388
             +LSP T YAAYLV K  + A GL+  P E  V   G  GS +G+R VYLD +  R   
Sbjct: 150 ATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGV---GLVGSENGKRNVYLDSQRGR--- 203

Query: 387 IQYVPHRLGLIRRRFGHVLRPGLSS------ATRSDGQFPSQRGDGWMEIELGEFYNEQG 226
                HR  L+RRR G   R  +        A+ ++GQ P +RGDGW+EIELGEF+ ++G
Sbjct: 204 ----AHRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKERGDGWLEIELGEFFCKEG 259

Query: 225 EDGVVEMSLQEVKAGHWKAGLIVQGIEVRPK 133
           EDG +EM +QEVK+G WK GL V+GIE+RPK
Sbjct: 260 EDGELEMRVQEVKSGDWKGGLTVEGIEIRPK 290



 Score = 95.1 bits (235), Expect(2) = 1e-71
 Identities = 43/83 (51%), Positives = 59/83 (71%)
 Frame = -2

Query: 1105 ILSLTSPRDTCTSSLVSSTFKSAADSDAIWEKFLPSDYKDIVSRSVEDLSTNKFASKKEL 926
            +L+ T PRD C  S+VSS FKSA +SDA+WE+FLP DY+ I+  S   +  +  +SKKEL
Sbjct: 14   VLAFTGPRDACRLSIVSSLFKSAGESDAVWERFLPRDYQSIIFTSDSYVLLSSLSSKKEL 73

Query: 925  YFRLCGDPVLLDEGNKSVNLDKK 857
            Y RLC  P+++D+G KS +L KK
Sbjct: 74   YLRLCEKPIIIDDGKKSFSLVKK 96


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  211 bits (536), Expect(2) = 4e-71
 Identities = 107/205 (52%), Positives = 137/205 (66%)
 Frame = -3

Query: 747 SVNLDKKSGKKCFMIGAKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLDIKVEID 568
           S++L+KKSGKKC+M+ A++L I W DTP YWKW   P SRF E AELI+VCWL+I+ +I+
Sbjct: 101 SISLEKKSGKKCYMLSARDLIIVWGDTPTYWKWNSDPSSRFGEVAELISVCWLEIRGKIN 160

Query: 567 TQILSPTTTYAAYLVIKFSDQASGLEDPPAEASVKFLGGGGSASGERTVYLDPECNRRPH 388
             +LSP T Y AYLV + +    GL+  P E  V   G  GS  G R VYLD E  RR  
Sbjct: 161 ATMLSPATLYTAYLVFRPTRGLYGLDYQPVEVGV---GLVGSECGMRNVYLDSERGRRQQ 217

Query: 387 IQYVPHRLGLIRRRFGHVLRPGLSSATRSDGQFPSQRGDGWMEIELGEFYNEQGEDGVVE 208
             +V  R+GL   R   V  P    A  ++GQ+P +R DGW+EIELGEF+ ++GED  +E
Sbjct: 218 YHFVSRRIGLF-NRCRIVGMPASEPARENNGQYPKKREDGWLEIELGEFFCKEGEDRELE 276

Query: 207 MSLQEVKAGHWKAGLIVQGIEVRPK 133
           MS+QEVK G WK GLIV+GIE+RPK
Sbjct: 277 MSVQEVKGGDWKGGLIVEGIEIRPK 301



 Score = 85.1 bits (209), Expect(2) = 4e-71
 Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = -2

Query: 1105 ILSLTSPRDTCTSSLVSSTFKSAADSDAIWEKFLPSDYKDIVSRS-VEDLSTNKFASKKE 929
            +LS T PRD C  S+V S FK+A +SD +WE+FLP DY+ I+S+S    +     +SKK 
Sbjct: 24   VLSFTCPRDACRLSMVCSLFKAAEESDFVWERFLPRDYQSIISKSDASSMLLASASSKKH 83

Query: 928  LYFRLCGDPVLLDEGNKSVNLDKK 857
            LY  LC  P++++ G KS++L+KK
Sbjct: 84   LYLMLCEKPLIIEGGKKSISLEKK 107


>ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis]
           gi|223546850|gb|EEF48347.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  204 bits (518), Expect(2) = 9e-70
 Identities = 106/213 (49%), Positives = 139/213 (65%), Gaps = 8/213 (3%)
 Frame = -3

Query: 747 SVNLDKKSGKKCFMIGAKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLDIKVEID 568
           S +LDK++GKKC+M+ A++LKI+W  TP YW+WI  PDSRF E AELI+VCWL+I   I 
Sbjct: 95  SFSLDKRNGKKCYMLSARDLKISWGGTPTYWRWISDPDSRFGEVAELISVCWLEISGTIS 154

Query: 567 TQILSPTTTYAAYLVIKFSDQASGLEDPPAEASVKFLGGGGSASGERTVYLDPECNRRPH 388
           T +LSP+T Y+AYLV K +++A GL DPP EA V+   G GS   +R +YLD + N R  
Sbjct: 155 TSLLSPSTMYSAYLVFKLNERAYGLHDPPVEAIVR--AGDGSEINKRIIYLDADTNLRG- 211

Query: 387 IQYVPHRLGLIRRRFGHVLRPGLSSATR------SDGQ--FPSQRGDGWMEIELGEFYNE 232
              V     L+R R G      ++  +       +DGQ     +RGDGW+E+ELGEF+N 
Sbjct: 212 ---VRQEPLLLRTRHGLFGPSDIAEESETPEHSGNDGQQSGSKERGDGWLEVELGEFFNR 268

Query: 231 QGEDGVVEMSLQEVKAGHWKAGLIVQGIEVRPK 133
            G    +EMS+ EVK G WK GLIVQGIE+RPK
Sbjct: 269 DGNGEELEMSVLEVKGGKWKGGLIVQGIEIRPK 301



 Score = 87.4 bits (215), Expect(2) = 9e-70
 Identities = 40/83 (48%), Positives = 54/83 (65%)
 Frame = -2

Query: 1105 ILSLTSPRDTCTSSLVSSTFKSAADSDAIWEKFLPSDYKDIVSRSVEDLSTNKFASKKEL 926
            I S T+PRD C  S VSS FK+A+ SD +WE FLP DY  I+S+S      +  +SKK L
Sbjct: 19   IFSFTTPRDACNLSTVSSKFKNASLSDTVWESFLPQDYNSIISQSSHPSLLSSCSSKKHL 78

Query: 925  YFRLCGDPVLLDEGNKSVNLDKK 857
            +  LC  P+++D G KS +LDK+
Sbjct: 79   FLSLCQKPIIIDNGKKSFSLDKR 101


>ref|XP_002512603.1| conserved hypothetical protein [Ricinus communis]
           gi|223548564|gb|EEF50055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score =  194 bits (493), Expect(2) = 1e-68
 Identities = 97/205 (47%), Positives = 130/205 (63%)
 Frame = -3

Query: 747 SVNLDKKSGKKCFMIGAKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLDIKVEID 568
           S +LDK SGKKC+M+ A++L I W DTP+YW+W     SRF E AELI VCWL+I  +I 
Sbjct: 101 SFSLDKLSGKKCYMLSARDLMIVWGDTPRYWRWTSELKSRFEEVAELIGVCWLEICGKIS 160

Query: 567 TQILSPTTTYAAYLVIKFSDQASGLEDPPAEASVKFLGGGGSASGERTVYLDPECNRRPH 388
            ++LSP T YAAY V K +  A G +  P E +V   G  G+   +R+VYLD E  R+  
Sbjct: 161 ARMLSPETLYAAYFVYKTTAGAYGFDHQPVEVTV---GLAGTEGCKRSVYLDAERERQQR 217

Query: 387 IQYVPHRLGLIRRRFGHVLRPGLSSATRSDGQFPSQRGDGWMEIELGEFYNEQGEDGVVE 208
            Q V  R+GL        L+  + +   +DG  P +R DGW+EIELG F+N++ +DG +E
Sbjct: 218 YQIVIRRIGLFSHSRALGLQAPVPTRENNDGMHPQEREDGWLEIELGTFFNKEDDDGDLE 277

Query: 207 MSLQEVKAGHWKAGLIVQGIEVRPK 133
           M + EV  G WK GLIVQGI++RPK
Sbjct: 278 MKVLEVNGGDWKGGLIVQGIDIRPK 302



 Score = 93.6 bits (231), Expect(2) = 1e-68
 Identities = 43/82 (52%), Positives = 57/82 (69%)
 Frame = -2

Query: 1105 ILSLTSPRDTCTSSLVSSTFKSAADSDAIWEKFLPSDYKDIVSRSVEDLSTNKFASKKEL 926
            +LS T P D    S+VS TFKSA++SDA+WE FLP+DY  I+S S      +  +SKK+L
Sbjct: 25   VLSFTGPADVGRLSMVSFTFKSASESDAVWESFLPNDYHSIISSSSSSFLLSSSSSKKDL 84

Query: 925  YFRLCGDPVLLDEGNKSVNLDK 860
            Y RLC  P+L+D+G KS +LDK
Sbjct: 85   YLRLCDSPILIDDGKKSFSLDK 106