BLASTX nr result

ID: Coptis21_contig00013533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013533
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279773.2| PREDICTED: regulator of telomere elongation ...   186   1e-45
emb|CBI36156.3| unnamed protein product [Vitis vinifera]              186   1e-45
ref|XP_002298143.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_003566832.1| PREDICTED: regulator of telomere elongation ...   177   1e-42
ref|XP_002528200.1| regulator of telomere elongation helicase 1 ...   177   1e-42

>ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
           vinifera]
          Length = 1084

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/114 (76%), Positives = 98/114 (85%), Gaps = 4/114 (3%)
 Frame = -2

Query: 332 LRGRAQTNACHFVCKKRK----CSHHSSVTGFVKNNSNLGDDPIDIEDLVNIGRSQGPCP 165
           LRGRAQTNACH +C+KR     C H+S V+ F+K N  LGDDPIDIEDLVNIGRS GPCP
Sbjct: 142 LRGRAQTNACHSLCRKRTKKGYCGHYSRVSDFMKYNPGLGDDPIDIEDLVNIGRSNGPCP 201

Query: 164 YYLSRELHKVVDILFAPYNYLIDRGNRKSLTIKWEDSVLIFDEAHNLESICADA 3
           YY+SRELHKVVDILFAPYNYLIDRGNRKSL++ W +S+LIFDEAHNLE +CADA
Sbjct: 202 YYVSRELHKVVDILFAPYNYLIDRGNRKSLSVCWNNSILIFDEAHNLEGLCADA 255


>emb|CBI36156.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/114 (76%), Positives = 98/114 (85%), Gaps = 4/114 (3%)
 Frame = -2

Query: 332 LRGRAQTNACHFVCKKRK----CSHHSSVTGFVKNNSNLGDDPIDIEDLVNIGRSQGPCP 165
           LRGRAQTNACH +C+KR     C H+S V+ F+K N  LGDDPIDIEDLVNIGRS GPCP
Sbjct: 120 LRGRAQTNACHSLCRKRTKKGYCGHYSRVSDFMKYNPGLGDDPIDIEDLVNIGRSNGPCP 179

Query: 164 YYLSRELHKVVDILFAPYNYLIDRGNRKSLTIKWEDSVLIFDEAHNLESICADA 3
           YY+SRELHKVVDILFAPYNYLIDRGNRKSL++ W +S+LIFDEAHNLE +CADA
Sbjct: 180 YYVSRELHKVVDILFAPYNYLIDRGNRKSLSVCWNNSILIFDEAHNLEGLCADA 233


>ref|XP_002298143.1| predicted protein [Populus trichocarpa] gi|222845401|gb|EEE82948.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  185 bits (469), Expect = 4e-45
 Identities = 84/113 (74%), Positives = 99/113 (87%), Gaps = 3/113 (2%)
 Frame = -2

Query: 332 LRGRAQTNACHFVCK---KRKCSHHSSVTGFVKNNSNLGDDPIDIEDLVNIGRSQGPCPY 162
           LRG+ Q NACH +CK   KR+C+H+S V  +VK N +LGD+P+DIEDLVNIGR+ GPCPY
Sbjct: 143 LRGKVQNNACHLICKTRGKRQCTHYSRVADYVKCNPHLGDEPVDIEDLVNIGRTFGPCPY 202

Query: 161 YLSRELHKVVDILFAPYNYLIDRGNRKSLTIKWEDSVLIFDEAHNLESICADA 3
           Y+SRELHKVVDILFAPYNYLIDRGNRKSL I W++S+LIFDEAHNLES+CADA
Sbjct: 203 YISRELHKVVDILFAPYNYLIDRGNRKSLAIDWDNSILIFDEAHNLESLCADA 255


>ref|XP_003566832.1| PREDICTED: regulator of telomere elongation helicase 1-like
           [Brachypodium distachyon]
          Length = 872

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/111 (72%), Positives = 97/111 (87%), Gaps = 1/111 (0%)
 Frame = -2

Query: 332 LRGRAQTNACHFVCKKRKCSHHSSVTGFVKNNSNLGDDPIDIEDLVNIGRSQGPCPYYLS 153
           LRG+AQ N CH++CKKR C H++ VT +++NNS LG +P DIEDLVNIGR++GPCPYY+S
Sbjct: 19  LRGKAQNNGCHYLCKKRLCCHNNIVTEYMRNNSELGSEPFDIEDLVNIGRTKGPCPYYIS 78

Query: 152 RELHKVVDILFAPYNYLIDRGNRKSLT-IKWEDSVLIFDEAHNLESICADA 3
           REL K VDILFAPYNYLID GNR+SLT I W+++VLIFDEAHNLESICADA
Sbjct: 79  RELSKSVDILFAPYNYLIDPGNRRSLTGIPWDNAVLIFDEAHNLESICADA 129


>ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
           [Ricinus communis] gi|223532412|gb|EEF34207.1| regulator
           of telomere elongation helicase 1 rtel1, putative
           [Ricinus communis]
          Length = 1049

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/113 (71%), Positives = 97/113 (85%), Gaps = 3/113 (2%)
 Frame = -2

Query: 332 LRGRAQTNACHFVCK---KRKCSHHSSVTGFVKNNSNLGDDPIDIEDLVNIGRSQGPCPY 162
           LRG+AQTNACH+VCK   KR+C+H + V+ +V+ N +LGD+P+DIEDLV +GR  GPCPY
Sbjct: 142 LRGKAQTNACHYVCKRREKRQCTHFARVSDYVRKNPHLGDEPVDIEDLVKMGRRFGPCPY 201

Query: 161 YLSRELHKVVDILFAPYNYLIDRGNRKSLTIKWEDSVLIFDEAHNLESICADA 3
           Y+SRELHKVVDILFAPYNYLIDR  RKSL I W+ S+LIFDEAHNLES+CADA
Sbjct: 202 YVSRELHKVVDILFAPYNYLIDRSYRKSLKIDWDKSILIFDEAHNLESLCADA 254


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