BLASTX nr result

ID: Coptis21_contig00013529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013529
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|22...   160   7e-39
ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...   158   1e-37
emb|CBI15558.3| unnamed protein product [Vitis vinifera]              158   6e-37
ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine ...   154   2e-35
gb|AAF97835.1|AC034107_18 EST gb|AI997943 comes from this gene [...   151   9e-35

>ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|223527791|gb|EEF29891.1|
           Golgin-84, putative [Ricinus communis]
          Length = 691

 Score =  160 bits (406), Expect(2) = 7e-39
 Identities = 85/128 (66%), Positives = 103/128 (80%)
 Frame = -3

Query: 651 PTAVEVELKRRLTQLTNHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKLAPQVSDIA 472
           PT VE+ELKRRL QLT+HLIQKQ+QVEALS+EKAT+LFRIE VSRLL+E+          
Sbjct: 538 PTEVEIELKRRLAQLTDHLIQKQAQVEALSSEKATLLFRIEAVSRLLDENA--------- 588

Query: 471 GPSSSEDLEAGTWEVSKAKLRPLFANNIQSGSRHLGSLLRQLDVIFSAGAAFLRRNSSAK 292
             S+S DLE+GTWE S +KLRPLF + I+SG +HLGSLL+QLDVIF AGA F+RRN +AK
Sbjct: 589 --SNSRDLESGTWERSDSKLRPLFEDKIRSGRKHLGSLLKQLDVIFMAGALFVRRNPAAK 646

Query: 291 FFALVYLV 268
            ++LVYLV
Sbjct: 647 LWSLVYLV 654



 Score = 25.8 bits (55), Expect(2) = 7e-39
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -2

Query: 160 GAVISLESINKTSG 119
           GAVISLE+IN+T+G
Sbjct: 677 GAVISLENINQTAG 690


>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score =  158 bits (400), Expect(2) = 1e-37
 Identities = 84/128 (65%), Positives = 103/128 (80%)
 Frame = -3

Query: 651 PTAVEVELKRRLTQLTNHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKLAPQVSDIA 472
           PT VEVELKRRL QLT+HLIQKQ+QVEALS+EKAT+LFRIE VSRLLEE+KL        
Sbjct: 526 PTVVEVELKRRLFQLTDHLIQKQAQVEALSSEKATLLFRIEAVSRLLEENKLLLL----- 580

Query: 471 GPSSSEDLEAGTWEVSKAKLRPLFANNIQSGSRHLGSLLRQLDVIFSAGAAFLRRNSSAK 292
              S +DLE+G+W++S +KL+PL  + I+SG +H  SL+RQLD IFSAGA FLRRNS+AK
Sbjct: 581 ---SRDDLESGSWDISDSKLKPLLEDRIRSGGQHFWSLMRQLDTIFSAGAVFLRRNSTAK 637

Query: 291 FFALVYLV 268
           ++AL YLV
Sbjct: 638 WWALFYLV 645



 Score = 23.9 bits (50), Expect(2) = 1e-37
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 160 GAVISLESINKTSG 119
           GAV+SLE+IN T G
Sbjct: 668 GAVMSLENINSTGG 681


>emb|CBI15558.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  158 bits (400), Expect(2) = 6e-37
 Identities = 84/128 (65%), Positives = 103/128 (80%)
 Frame = -3

Query: 651 PTAVEVELKRRLTQLTNHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKLAPQVSDIA 472
           PT VEVELKRRL QLT+HLIQKQ+QVEALS+EKAT+LFRIE VSRLLEE+KL        
Sbjct: 108 PTVVEVELKRRLFQLTDHLIQKQAQVEALSSEKATLLFRIEAVSRLLEENKLLLL----- 162

Query: 471 GPSSSEDLEAGTWEVSKAKLRPLFANNIQSGSRHLGSLLRQLDVIFSAGAAFLRRNSSAK 292
              S +DLE+G+W++S +KL+PL  + I+SG +H  SL+RQLD IFSAGA FLRRNS+AK
Sbjct: 163 ---SRDDLESGSWDISDSKLKPLLEDRIRSGGQHFWSLMRQLDTIFSAGAVFLRRNSTAK 219

Query: 291 FFALVYLV 268
           ++AL YLV
Sbjct: 220 WWALFYLV 227



 Score = 21.6 bits (44), Expect(2) = 6e-37
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 160 GAVISLESINKT 125
           GAV+SLE+IN T
Sbjct: 250 GAVMSLENINST 261


>ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score =  154 bits (388), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 102/128 (79%)
 Frame = -3

Query: 651 PTAVEVELKRRLTQLTNHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKLAPQVSDIA 472
           PT VEVELKRRL Q+T+HLIQKQ++VE+LS+EKA+++FRIE VSRLL+E+  A   +++ 
Sbjct: 525 PTEVEVELKRRLQQMTDHLIQKQAKVESLSSEKASLVFRIEAVSRLLDENMSASGAANMN 584

Query: 471 GPSSSEDLEAGTWEVSKAKLRPLFANNIQSGSRHLGSLLRQLDVIFSAGAAFLRRNSSAK 292
             SSS DLE+G WE+S +KL+P+    I SG R LGSLL+QLD IF  GA FL+RNS+AK
Sbjct: 585 PASSSSDLESGLWELSNSKLKPMLKARIHSGKRQLGSLLQQLDYIFVTGALFLKRNSTAK 644

Query: 291 FFALVYLV 268
            +AL+YLV
Sbjct: 645 LWALIYLV 652


>gb|AAF97835.1|AC034107_18 EST gb|AI997943 comes from this gene [Arabidopsis thaliana]
          Length = 654

 Score =  151 bits (382), Expect = 9e-35
 Identities = 80/128 (62%), Positives = 100/128 (78%)
 Frame = -3

Query: 651 PTAVEVELKRRLTQLTNHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKLAPQVSDIA 472
           PT VE+ELKRRL QLT+HLIQKQSQVEALS+EKAT+LFRIE VSRL+EE+K        A
Sbjct: 493 PTEVEIELKRRLNQLTDHLIQKQSQVEALSSEKATILFRIEAVSRLIEENK-----GMSA 547

Query: 471 GPSSSEDLEAGTWEVSKAKLRPLFANNIQSGSRHLGSLLRQLDVIFSAGAAFLRRNSSAK 292
             +SS+DLEAG WE+S +K +P F + I+SG +HLG L+ QL+ IF +G  FLRRN +AK
Sbjct: 548 TEASSQDLEAGDWELSGSKFKPAFQDKIRSGKKHLGWLVMQLNAIFISGTVFLRRNPTAK 607

Query: 291 FFALVYLV 268
            +A+VYLV
Sbjct: 608 IWAVVYLV 615


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