BLASTX nr result

ID: Coptis21_contig00013526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013526
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165255.1| PREDICTED: protein notum homolog, partial [C...    84   2e-14
ref|XP_004142204.1| PREDICTED: protein notum homolog [Cucumis sa...    84   2e-14
ref|XP_002532332.1| pectin acetylesterase, putative [Ricinus com...    84   2e-14
ref|XP_003551467.1| PREDICTED: protein notum homolog [Glycine max]     83   4e-14
gb|AFW82861.1| hypothetical protein ZEAMMB73_240371 [Zea mays] g...    81   1e-13

>ref|XP_004165255.1| PREDICTED: protein notum homolog, partial [Cucumis sativus]
          Length = 430

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
 Frame = -2

Query: 283 MASHRGVIWLRKLGNKDYIIGFTVISLALLLILTTFDSSSPPIQSTTPN----------P 134
           ++  R ++W  K   KD+ I   VI  A +  + +F S S   + +  N          P
Sbjct: 3   ISGFRSLLWWSKWSKKDWAIA--VICFAFIFFVFSFFSDSWHAEDSGINHTFDLNPANDP 60

Query: 133 PLVKLSLLRNANSLGAVCLDGSPPGYHFRKGFGSGSRNWLLHIE 2
            LV L+LL+NA + GA+CLDGS PGYHF+KGFGSGS NW+LHIE
Sbjct: 61  DLVDLTLLQNAKAKGALCLDGSLPGYHFQKGFGSGSSNWVLHIE 104


>ref|XP_004142204.1| PREDICTED: protein notum homolog [Cucumis sativus]
          Length = 469

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
 Frame = -2

Query: 283 MASHRGVIWLRKLGNKDYIIGFTVISLALLLILTTFDSSSPPIQSTTPN----------P 134
           ++  R ++W  K   KD+ I   VI  A +  + +F S S   + +  N          P
Sbjct: 3   ISGFRSLLWWSKWSKKDWAIA--VICFAFIFFVFSFFSDSWHAEDSGINHTFDLNPANDP 60

Query: 133 PLVKLSLLRNANSLGAVCLDGSPPGYHFRKGFGSGSRNWLLHIE 2
            LV L+LL+NA + GA+CLDGS PGYHF+KGFGSGS NW+LHIE
Sbjct: 61  DLVDLTLLQNAKAKGALCLDGSLPGYHFQKGFGSGSSNWVLHIE 104


>ref|XP_002532332.1| pectin acetylesterase, putative [Ricinus communis]
           gi|223527975|gb|EEF30059.1| pectin acetylesterase,
           putative [Ricinus communis]
          Length = 425

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
 Frame = -2

Query: 277 SHRGVIWLRKLGNKDYIIG---FTVISLALLLILTTFDSSSPP---IQSTTPNPPLVKLS 116
           ++R ++  RK   KDY IG    TVI+     +L+T  S++PP   + +      LV L+
Sbjct: 5   AYRTILSRRKFAKKDYAIGGIGLTVITFCAFALLST--SNTPPDLQLTAAAAADDLVDLT 62

Query: 115 LLRNANSLGAVCLDGSPPGYHFRKGFGSGSRNWLLHIE 2
           LL NA    A+CLDGS PGYHF++GFGSGS  WLLHIE
Sbjct: 63  LLHNAKDKDALCLDGSLPGYHFQEGFGSGSNRWLLHIE 100


>ref|XP_003551467.1| PREDICTED: protein notum homolog [Glycine max]
          Length = 428

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 46/86 (53%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -2

Query: 256 LRKLGNKDYIIG-FTVISLALLLILTTFDSSSPPIQSTTPNPPLVKLSLLRNANSLGAVC 80
           LR   +KDY I  F  + L  LL+ +  DS      S   +  LV L+LLRNAN   A+C
Sbjct: 21  LRIWSSKDYAIAAFIFLILFSLLLFSHLDSR---YDSQPHHSKLVPLTLLRNANQTRALC 77

Query: 79  LDGSPPGYHFRKGFGSGSRNWLLHIE 2
           LDGS PGYHF+ GFGSGSRNWL+HIE
Sbjct: 78  LDGSAPGYHFQSGFGSGSRNWLIHIE 103


>gb|AFW82861.1| hypothetical protein ZEAMMB73_240371 [Zea mays]
           gi|413950213|gb|AFW82862.1| hypothetical protein
           ZEAMMB73_240371 [Zea mays]
          Length = 212

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
 Frame = -2

Query: 280 ASHRGVIWLRKLGNKDYI---IGFTVISLALLLILTTFDSSSPPIQSTTPNPPLVKLSLL 110
           ASH   +W R+ G    +       +++ ALLL L+++ S   P  S    P LV L+L+
Sbjct: 10  ASHHLRLWWRRRGRAGAVGATFAVALLATALLLALSSYASIVFPASSGRRGPALVGLTLV 69

Query: 109 RNANSLGAVCLDGSPPGYHFRKGFGSGSRNWLLHIE 2
           R A+  GA+CLDGS PGYH + G GSGSR+WL+H+E
Sbjct: 70  RRASEKGALCLDGSAPGYHLQGGSGSGSRSWLIHLE 105


Top