BLASTX nr result

ID: Coptis21_contig00013515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013515
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    89   3e-16
emb|CAN66085.1| hypothetical protein VITISV_018645 [Vitis vinifera]    89   3e-16
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...    89   5e-16
emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]    89   5e-16
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]    88   6e-16

>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 30/140 (21%)
 Frame = -2

Query: 334 WMAQGFLSYDSSKDLEKIGTNFFNDLAMRSLFQDFKKDSEGNVIGCKMHDLVHDFARHLA 155
           WMAQ +L  D SK++E IG  +F  LA RS FQDF+KD++GN+I CKMHD+VHDFA+ L 
Sbjct: 427 WMAQSYLKSDGSKEMEMIGRTYFEYLAARSFFQDFEKDTDGNIIRCKMHDIVHDFAQFLT 486

Query: 154 KCESSIFMENDREVGNI-----RLRHFGAAIWVCTS------------------------ 62
           + E  I   +++++ +I     ++RH    +   T                         
Sbjct: 487 QNECFIVEVDNQQMESIDLSFKKIRHITLVVRESTPNFVSTYNMKNLHTLLAKEAFKSSV 546

Query: 61  -ARLKLIICQMTCLRVLDLS 5
              L  ++  +TCLR LDLS
Sbjct: 547 LVALPNLLRHLTCLRALDLS 566


>emb|CAN66085.1| hypothetical protein VITISV_018645 [Vitis vinifera]
          Length = 856

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 30/140 (21%)
 Frame = -2

Query: 334 WMAQGFLSYDSSKDLEKIGTNFFNDLAMRSLFQDFKKDSEGNVIGCKMHDLVHDFARHLA 155
           WMAQ +L  D SK++E IG  +F  LA RS FQDF+KD++GN+I CKMHD+VHDFA+ L 
Sbjct: 427 WMAQSYLKSDGSKEMEMIGRTYFEYLAARSFFQDFEKDTDGNIIRCKMHDIVHDFAQFLT 486

Query: 154 KCESSIFMENDREVGNI-----RLRHFGAAIWVCTS------------------------ 62
           + E  I   +++++ +I     ++RH    +   T                         
Sbjct: 487 QNECFIVEVDNQQMESIDLSFKKIRHITLVVRESTPNFVSTYNMKNLHTLLAKEAFKSSV 546

Query: 61  -ARLKLIICQMTCLRVLDLS 5
              L  ++  +TCLR LDLS
Sbjct: 547 LVALPNLLRHLTCLRALDLS 566


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 26/136 (19%)
 Frame = -2

Query: 334 WMAQGFLSYDSSKDLEKIGTNFFNDLAMRSLFQDFKKDSEGNVIGCKMHDLVHDFARHLA 155
           WMAQ +L  D  K++E +G  +F  LA RS FQDF+KD +GN+I CKMHD+VHDFA+ L 
Sbjct: 449 WMAQSYLKSDGCKEMEMVGRTYFEYLAARSFFQDFEKDDDGNIIRCKMHDIVHDFAQFLT 508

Query: 154 KCESSIFMENDREVGNI-----RLRHFGAAI--------WVCTSARLKLIICQ------- 35
           + E  I   ++++ G++     ++RH    +          C    L  ++ +       
Sbjct: 509 QNECFIVEVDNQKKGSMDLFFQKIRHATLVVRESTPNFASTCNMKNLHTLLAKKAFDSRV 568

Query: 34  ------MTCLRVLDLS 5
                 +TCLR LDLS
Sbjct: 569 LEALGNLTCLRALDLS 584


>emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]
          Length = 1295

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 26/136 (19%)
 Frame = -2

Query: 334 WMAQGFLSYDSSKDLEKIGTNFFNDLAMRSLFQDFKKDSEGNVIGCKMHDLVHDFARHLA 155
           WMAQ +L  D SK++E +G  +F  LA RS FQDF+KD +GN+I CKMHD+VHDFA+ L 
Sbjct: 491 WMAQSYLKSDGSKEMEMVGRTYFEYLAARSFFQDFEKDXDGNIIRCKMHDIVHDFAQFLT 550

Query: 154 KCESSIFMENDREVGNI-----RLRHFGAAI--------WVCTSARLKLIICQ------- 35
             E  I    +++ G++     ++RH    +          C    L  ++ +       
Sbjct: 551 XNECFIVEVXNQKKGSMDLFFQKIRHATLVVRESTPNFASTCNMKNLHTLLAKKAFDSRV 610

Query: 34  ------MTCLRVLDLS 5
                 +TCLR LDLS
Sbjct: 611 LEALGHLTCLRALDLS 626



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/81 (40%), Positives = 44/81 (54%)
 Frame = -2

Query: 247  SLFQDFKKDSEGNVIGCKMHDLVHDFARHLAKCESSIFMENDREVGNIRLRHFGAAIWVC 68
            S FQDF+KD + ++I CKMHD+VHDFA+ L K E  I    + E G  +      +    
Sbjct: 968  SFFQDFEKDGDDDIIRCKMHDIVHDFAQFLTKNECFIMNVENAEEGRTK-----TSFQKI 1022

Query: 67   TSARLKLIICQMTCLRVLDLS 5
              A L      +TCLR LDL+
Sbjct: 1023 RHATLNXATEHLTCLRALDLA 1043


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 31/141 (21%)
 Frame = -2

Query: 334 WMAQGFLSYDSSKDLEKIGTNFFNDLAMRSLFQDFKKDSEGNVIGCKMHDLVHDFARHLA 155
           WMAQ +L+ D SK++E +G  +F  LA RS FQDF+KD +GN+I CKMHD+VHDFA+ L 
Sbjct: 449 WMAQSYLNSDRSKEMEMVGRTYFEYLAARSFFQDFEKDDDGNIICCKMHDIVHDFAQFLT 508

Query: 154 KCESSIFMENDREVGNI-----RLRHFGAAI--------WVCTSARLKLIICQ------- 35
           + E  I   ++++ G++     ++RH    +          C    L  ++ +       
Sbjct: 509 QNECFIVEVDNQKKGSMDLFFQKIRHATLVVRESTPNFASTCNMKNLHTLLAKEEFBISX 568

Query: 34  -----------MTCLRVLDLS 5
                      +TCLR LDLS
Sbjct: 569 VLEALXNLLRHLTCLRALDLS 589


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