BLASTX nr result

ID: Coptis21_contig00013514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013514
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632840.1| PREDICTED: putative disease resistance prote...   119   3e-25
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]   118   6e-25
ref|XP_003632834.1| PREDICTED: putative disease resistance prote...   117   7e-25
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   114   8e-24
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   113   2e-23

>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score =  119 bits (298), Expect = 3e-25
 Identities = 75/179 (41%), Positives = 100/179 (55%), Gaps = 28/179 (15%)
 Frame = -3

Query: 459 QDFKKDREGNVVVCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRHFGAAKD 295
           QDF+KD +GN++ CKMHD+VHDFAQ L ++E  I   +++++ +I     K+RH      
Sbjct: 459 QDFEKDTDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESIDLSFKKIRHITLVVR 518

Query: 294 VEDEANDVEDINVR---------------------LICQMTCLRVLDLSETSL-EELPDE 181
            E   N V   N++                     L+  +TCLR LDLS   L EELP E
Sbjct: 519 -ESTPNFVSTYNMKNLHTLLAKEAFKSSVLVALPNLLRHLTCLRALDLSSNQLIEELPKE 577

Query: 180 VEXXXXXXXXXLS-YMEMEELPETVCNLFNLQTLKLNGCRFLRKLPEGIGKLRNLRHLE 7
           V          LS    + ELPET+C+L+NLQTL + GC  LRKLP+ +GKL NLRHLE
Sbjct: 578 VGKLIHLRFLNLSGCFWLRELPETICDLYNLQTLNIQGCSSLRKLPQAMGKLINLRHLE 636


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score =  118 bits (295), Expect = 6e-25
 Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 28/179 (15%)
 Frame = -3

Query: 459  QDFKKDREGNVVVCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRH------ 313
            QDF+KD +GN++ CKMHD+VHDFAQ L ++E  I   ++++ G++     K+RH      
Sbjct: 481  QDFEKDDDGNIICCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVR 540

Query: 312  -----FGAAKDVED----------EANDVEDINVRLICQMTCLRVLDLSETSL-EELPDE 181
                 F +  ++++          + + V +    L+  +TCLR LDLS   L EELP E
Sbjct: 541  ESTPNFASTCNMKNLHTLLAKEEFBISXVLEALXNLLRHLTCLRALDLSRNRLIEELPKE 600

Query: 180  VEXXXXXXXXXLSYM-EMEELPETVCNLFNLQTLKLNGCRFLRKLPEGIGKLRNLRHLE 7
            V          LS    + ELPET+C+L+NLQTL + GC  L+KLP+ +GKL NLRHLE
Sbjct: 601  VGKLIHLRYLNLSLCYRLRELPETICDLYNLQTLNIEGCSSLQKLPQAMGKLINLRHLE 659


>ref|XP_003632834.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 904

 Score =  117 bits (294), Expect = 7e-25
 Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 23/174 (13%)
 Frame = -3

Query: 459 QDFKKDREGNVVVCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRH------ 313
           QDF+KD +GN++ C+MHD+VHDFAQ L ++E  I   ++++ G++     K+RH      
Sbjct: 462 QDFEKDTDGNIIRCEMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVR 521

Query: 312 -----FGAAKDVEDE----ANDVEDINV-RLICQMTCLRVLDLSETS-LEELPDEVEXXX 166
                F +  ++++     A +  D  V   +  +TCLR LDLS    +EELP EV    
Sbjct: 522 ESTPNFASTCNMKNLHTLLAKEAFDSRVLEALGNLTCLRALDLSSNDWIEELPKEVGKLI 581

Query: 165 XXXXXXLSYME-MEELPETVCNLFNLQTLKLNGCRFLRKLPEGIGKLRNLRHLE 7
                 LS+ E + ELPET+C+L+NLQTL + GC  L+KLP  +GKL NLRHLE
Sbjct: 582 HLRYLNLSWCESLRELPETICDLYNLQTLNIEGCSSLQKLPHAMGKLINLRHLE 635


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 923

 Score =  114 bits (285), Expect = 8e-24
 Identities = 71/175 (40%), Positives = 97/175 (55%), Gaps = 24/175 (13%)
 Frame = -3

Query: 459  QDFKKDREGNVVVCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRHFGAAKD 295
            QDF+KD +GN++ CKMHD+VHDFAQ L  +E  I   ++++ G++     K+RH      
Sbjct: 482  QDFEKDDDGNIIHCKMHDIVHDFAQFLTLNECFIVEVDNQKKGSMDLFFQKIRHATLVVR 541

Query: 294  VEDEANDVEDINVR-----------------LICQMTCLRVLDLSETSL-EELPDEVEXX 169
             E   N     N++                  +  +TCLR LDL    L EELP EV   
Sbjct: 542  -ESTPNFASTCNMKNLHTLLAKRAFDSRVLEALGHLTCLRALDLRSNQLIEELPKEVGKL 600

Query: 168  XXXXXXXLSYME-MEELPETVCNLFNLQTLKLNGCRFLRKLPEGIGKLRNLRHLE 7
                   LSY + + ELPET+C+L+NLQTL +  C  L+KLP+ +GKL NLRHLE
Sbjct: 601  IHLRYLNLSYCDSLRELPETICDLYNLQTLNIQACSRLQKLPQAMGKLINLRHLE 655


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score =  113 bits (282), Expect = 2e-23
 Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 23/174 (13%)
 Frame = -3

Query: 459 QDFKKDREGNVVVCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRH------ 313
           QDF+KD +GN++ CKMHD+VHDFAQ L ++E  I   ++++ G++     K+RH      
Sbjct: 481 QDFEKDDDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVR 540

Query: 312 -----FGAAKDVED----EANDVEDINV-RLICQMTCLRVLDLSETSL-EELPDEVEXXX 166
                F +  ++++     A    D  V   +  +TCLR LDLS   L EELP EV    
Sbjct: 541 ESTPNFASTCNMKNLHTLLAKKAFDSRVLEALGNLTCLRALDLSRNRLIEELPKEVGKLI 600

Query: 165 XXXXXXLSY-MEMEELPETVCNLFNLQTLKLNGCRFLRKLPEGIGKLRNLRHLE 7
                 LS    + ELPET+C+L+NLQTL + GC  +RKLP+ +GKL NLRHLE
Sbjct: 601 HLRYLNLSLCYSLRELPETICDLYNLQTLNIQGC-IIRKLPQAMGKLINLRHLE 653


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