BLASTX nr result

ID: Coptis21_contig00013441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013441
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEE69131.1| GRAS family transcription factor [Citrus medica v...   139   1e-30
emb|CBI20484.3| unnamed protein product [Vitis vinifera]              139   1e-30
ref|XP_003540429.1| PREDICTED: chitin-inducible gibberellin-resp...   139   2e-30
ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-resp...   137   4e-30
dbj|BAI94488.1| GRAS family transcription factor [Dianthus caryo...   134   3e-29

>gb|AEE69131.1| GRAS family transcription factor [Citrus medica var. sarcodactylis]
          Length = 411

 Score =  139 bits (350), Expect = 1e-30
 Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 6/171 (3%)
 Frame = -2

Query: 826 NSFEAVGEWVMSLPRKCMLPIEFHPVPVFAQDVTLEMIGIRPGEALAVMFPVQLHQTSQR 647
           +  EAVG  + ++ +K  + +EF+P+PVFA DVTLEM+G+RPGEALAV FP+QLH T   
Sbjct: 195 DGLEAVGRRLAAISQKFNILVEFNPIPVFAPDVTLEMLGVRPGEALAVNFPLQLHHTPDE 254

Query: 646 SIEIYNNSDKILRMVRSLSPKVVTLVDLELSPNSKPFLARFAETLDFCAHICDSFE-TMP 470
           S+++ N  D +LRM++SL+PKVVTLV+ E + N+  FL RF ETL++   + +S + TMP
Sbjct: 255 SVDLNNPRDGLLRMIKSLNPKVVTLVEQESNTNTAAFLPRFVETLNYYLAMFESIDVTMP 314

Query: 469 RFYLNRVTIEQHYLGEH----HCMRGRNGGAPYS-VATWKYKFKNSGFQPC 332
           R    R+ +EQH L           GR     +  +  W+ +F  +GF+ C
Sbjct: 315 RDQKERINVEQHCLARDIVNVIACEGRERVERHELLGKWRSRFTMAGFRQC 365


>emb|CBI20484.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  139 bits (350), Expect = 1e-30
 Identities = 66/133 (49%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
 Frame = -2

Query: 823 SFEAVGEWVMSLPRKCMLPIEFHPVPVFAQDVTLEMIGIRPGEALAVMFPVQLHQTSQRS 644
           SF ++G+ + ++  K  +P+EFHPVPVFA D+T EM+ +RPGEALAV FP+QLH T   S
Sbjct: 179 SFSSIGKRLAAISEKFKIPVEFHPVPVFAPDITQEMLDVRPGEALAVNFPLQLHHTPDES 238

Query: 643 IEIYNNSDKILRMVRSLSPKVVTLVDLELSPNSKPFLARFAETLDFCAHICDSFE-TMPR 467
           +++ N  D++LRMV+SLSPKV TLV+ E + N+ PF  RF ETLD+ + + +S +  +PR
Sbjct: 239 VDVNNPRDELLRMVKSLSPKVTTLVEQESNTNTTPFFTRFIETLDYYSAMFESIDVALPR 298

Query: 466 FYLNRVTIEQHYL 428
               R+ +EQH L
Sbjct: 299 ERKERINVEQHCL 311


>ref|XP_003540429.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like
           [Glycine max]
          Length = 571

 Score =  139 bits (349), Expect = 2e-30
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
 Frame = -2

Query: 817 EAVGEWVMSLPRKCMLPIEFHPVPVFAQDVTLEMIGIRPGEALAVMFPVQLHQTSQRSIE 638
           E VG+ +  +  K  +P+EFH VPVFA DVT EM+ IRPGEALAV FP+QLH T+  S+ 
Sbjct: 357 EVVGKRLALMSEKFGIPVEFHGVPVFAPDVTREMLDIRPGEALAVNFPLQLHHTADESVH 416

Query: 637 IYNNSDKILRMVRSLSPKVVTLVDLELSPNSKPFLARFAETLDFCAHICDSFE-TMPRFY 461
           + N  D +LR+VRSLSPKV TLV+ E + N+ PF  RF ETLD+   I +S + T+PR  
Sbjct: 417 VSNPRDGLLRLVRSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRDS 476

Query: 460 LNRVTIEQHYLGEH-----HCMRGRNGGAPYSVATWKYKFKNSGFQPC 332
             R+ +EQH L         C              WK + K +GFQ C
Sbjct: 477 KERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLKMAGFQQC 524


>ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like
           [Vitis vinifera]
          Length = 583

 Score =  137 bits (346), Expect = 4e-30
 Identities = 66/131 (50%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
 Frame = -2

Query: 817 EAVGEWVMSLPRKCMLPIEFHPVPVFAQDVTLEMIGIRPGEALAVMFPVQLHQTSQRSIE 638
           +AVG+ + ++  K  +P+EFHPVPVFA D+T EM+ +RPGEALAV FP+QLH T   S++
Sbjct: 370 DAVGKRLAAISEKFKIPVEFHPVPVFAPDITQEMLDVRPGEALAVNFPLQLHHTPDESVD 429

Query: 637 IYNNSDKILRMVRSLSPKVVTLVDLELSPNSKPFLARFAETLDFCAHICDSFE-TMPRFY 461
           + N  D++LRMV+SLSPKV TLV+ E + N+ PF  RF ETLD+ + + +S +  +PR  
Sbjct: 430 VNNPRDELLRMVKSLSPKVTTLVEQESNTNTTPFFTRFIETLDYYSAMFESIDVALPRER 489

Query: 460 LNRVTIEQHYL 428
             R+ +EQH L
Sbjct: 490 KERINVEQHCL 500


>dbj|BAI94488.1| GRAS family transcription factor [Dianthus caryophyllus]
          Length = 573

 Score =  134 bits (338), Expect = 3e-29
 Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
 Frame = -2

Query: 823 SFEAVGEWVMSLPRKCMLPIEFHPVPVFAQDVTLEMIGIRPGEALAVMFPVQLHQTSQRS 644
           + E VG  + +L  K  +P+EFHPVPVF  DVT EM+ +RPGEALAV FP+QLH T   S
Sbjct: 358 NLEPVGLRLKALSEKYQIPVEFHPVPVFGPDVTREMLDVRPGEALAVNFPLQLHHTPDES 417

Query: 643 IEIYNNSDKILRMVRSLSPKVVTLVDLELSPNSKPFLARFAETLDFCAHICDSFE-TMPR 467
           +++ N  D +LRMV+SL+PKV TLV+ E + N+ PFL RF ETL++ + + +S + TM R
Sbjct: 418 VDVNNPRDNLLRMVKSLNPKVTTLVEQESNTNTTPFLTRFIETLEYYSAMFESIDVTMAR 477

Query: 466 FYLNRVTIEQHYLGE 422
               R+ +EQH L +
Sbjct: 478 DRKERINVEQHCLAK 492


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