BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013340
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|2...   453   e-125
gb|AAO61645.1| NAD-dependent isocitrate dehydrogenase beta subun...   451   e-124
gb|AAO61647.1| NAD-dependent isocitrate dehydrogenase beta subun...   451   e-124
gb|AAC49964.1| NAD+ dependent isocitrate dehydrogenase subunit 1...   451   e-124
ref|NP_195252.1| Isocitrate dehydrogenase [NAD] regulatory subun...   451   e-124

>ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|222853600|gb|EEE91147.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  453 bits (1165), Expect = e-125
 Identities = 230/267 (86%), Positives = 242/267 (90%), Gaps = 6/267 (2%)
 Frame = +2

Query: 113 MAKR---ILKNLF---QTPHLSRSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIMS 274
           MA+R   +LK+L     TP L RS+TYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQ+M 
Sbjct: 1   MARRSIPVLKHLLTSSSTPTLRRSVTYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQVME 60

Query: 275 AMHAPIYFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKELD 454
           AMHAP+YFEK+  + G M ++P EVI SIKKNKVCLKGGL TP+GGGVSSLNVQLRKELD
Sbjct: 61  AMHAPVYFEKYD-IHGDMMRVPSEVIESIKKNKVCLKGGLATPMGGGVSSLNVQLRKELD 119

Query: 455 LYASLVNCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI 634
           LYASLVNCFNL GL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI
Sbjct: 120 LYASLVNCFNLQGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI 179

Query: 635 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQL 814
           AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA KYP I YNEIIVDNCCMQL
Sbjct: 180 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQL 239

Query: 815 VAKPEQFDVMVTPNLYGNLVANTAAGI 895
           V+KPEQFDVMVTPNLYGNLVANTAAGI
Sbjct: 240 VSKPEQFDVMVTPNLYGNLVANTAAGI 266


>gb|AAO61645.1| NAD-dependent isocitrate dehydrogenase beta subunit [Brassica
           napus] gi|28974500|gb|AAO61646.1| NAD-dependent
           isocitrate dehydrogenase beta subunit [Brassica napus]
          Length = 367

 Score =  451 bits (1159), Expect = e-124
 Identities = 226/268 (84%), Positives = 245/268 (91%), Gaps = 4/268 (1%)
 Frame = +2

Query: 104 LNQMAKRILKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIM 271
           +++ +  +LKNL +  + S    RS+TYMPRPGDG+PR VTLIPGDGIGPLVTNAVEQ+M
Sbjct: 1   MSRRSLTLLKNLARNSNASCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 272 SAMHAPIYFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKEL 451
            AMHAPIYFEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKEL
Sbjct: 61  EAMHAPIYFEKYD-VQGEMSRVPAEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKEL 119

Query: 452 DLYASLVNCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 631
           DL+ASLVNCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER
Sbjct: 120 DLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 179

Query: 632 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQ 811
           IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYP I YNEIIVDNCCMQ
Sbjct: 180 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCMQ 239

Query: 812 LVAKPEQFDVMVTPNLYGNLVANTAAGI 895
           LVAKPEQFDVMVTPNLYGNLVANTAAGI
Sbjct: 240 LVAKPEQFDVMVTPNLYGNLVANTAAGI 267


>gb|AAO61647.1| NAD-dependent isocitrate dehydrogenase beta subunit [Brassica
           napus]
          Length = 367

 Score =  451 bits (1159), Expect = e-124
 Identities = 226/268 (84%), Positives = 245/268 (91%), Gaps = 4/268 (1%)
 Frame = +2

Query: 104 LNQMAKRILKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIM 271
           +++ +  +LKNL +  + S    RS+TYMPRPGDG+PR VTLIPGDGIGPLVTNAVEQ+M
Sbjct: 1   MSRRSLTLLKNLARNSNASCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 272 SAMHAPIYFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKEL 451
            AMHAPIYFEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKEL
Sbjct: 61  EAMHAPIYFEKYD-VQGEMSRVPAEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKEL 119

Query: 452 DLYASLVNCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 631
           DL+ASLVNCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER
Sbjct: 120 DLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 179

Query: 632 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQ 811
           IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYP I YNEIIVDNCCMQ
Sbjct: 180 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCMQ 239

Query: 812 LVAKPEQFDVMVTPNLYGNLVANTAAGI 895
           LVAKPEQFDVMVTPNLYGNLVANTAAGI
Sbjct: 240 LVAKPEQFDVMVTPNLYGNLVANTAAGI 267


>gb|AAC49964.1| NAD+ dependent isocitrate dehydrogenase subunit 1 [Arabidopsis
           thaliana]
          Length = 367

 Score =  451 bits (1159), Expect = e-124
 Identities = 227/268 (84%), Positives = 246/268 (91%), Gaps = 4/268 (1%)
 Frame = +2

Query: 104 LNQMAKRILKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIM 271
           +++ +  +LKNL +  + S    RS+TYMPRPGDGAPR VTLIPGDGIGPLVTNAVEQ+M
Sbjct: 1   MSRRSLTLLKNLARNANGSGIQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 272 SAMHAPIYFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKEL 451
            AMHAPI+FEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKEL
Sbjct: 61  EAMHAPIFFEKYD-VHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKEL 119

Query: 452 DLYASLVNCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 631
           DL+ASLVNCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER
Sbjct: 120 DLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 179

Query: 632 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQ 811
           IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYPSI YNEIIVDNCCMQ
Sbjct: 180 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQ 239

Query: 812 LVAKPEQFDVMVTPNLYGNLVANTAAGI 895
           LVAKPEQFDVMVTPNLYGNLVANTAAGI
Sbjct: 240 LVAKPEQFDVMVTPNLYGNLVANTAAGI 267


>ref|NP_195252.1| Isocitrate dehydrogenase [NAD] regulatory subunit 1 [Arabidopsis
           thaliana] gi|122064253|sp|Q8LFC0.2|IDH1_ARATH RecName:
           Full=Isocitrate dehydrogenase [NAD] regulatory subunit
           1, mitochondrial; AltName: Full=IDH-I; AltName:
           Full=Isocitric dehydrogenase 1; AltName:
           Full=NAD(+)-specific ICDH 1; Flags: Precursor
           gi|16226887|gb|AAL16290.1|AF428360_1
           AT4g35260/F23E12_180 [Arabidopsis thaliana]
           gi|3080424|emb|CAA18743.1| NAD+ dependent isocitrate
           dehydrogenase subunit 1 [Arabidopsis thaliana]
           gi|7270478|emb|CAB80243.1| NAD+ dependent isocitrate
           dehydrogenase subunit 1 [Arabidopsis thaliana]
           gi|15146238|gb|AAK83602.1| AT4g35260/F23E12_180
           [Arabidopsis thaliana] gi|22136588|gb|AAM91080.1|
           AT4g35260/F23E12_180 [Arabidopsis thaliana]
           gi|332661086|gb|AEE86486.1| Isocitrate dehydrogenase
           [NAD] regulatory subunit 1 [Arabidopsis thaliana]
          Length = 367

 Score =  451 bits (1159), Expect = e-124
 Identities = 227/268 (84%), Positives = 246/268 (91%), Gaps = 4/268 (1%)
 Frame = +2

Query: 104 LNQMAKRILKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIM 271
           +++ +  +LKNL +  + S    RS+TYMPRPGDGAPR VTLIPGDGIGPLVTNAVEQ+M
Sbjct: 1   MSRRSLTLLKNLARNANGSGIQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 272 SAMHAPIYFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKEL 451
            AMHAPI+FEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKEL
Sbjct: 61  EAMHAPIFFEKYD-VHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKEL 119

Query: 452 DLYASLVNCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 631
           DL+ASLVNCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER
Sbjct: 120 DLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 179

Query: 632 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQ 811
           IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYPSI YNEIIVDNCCMQ
Sbjct: 180 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQ 239

Query: 812 LVAKPEQFDVMVTPNLYGNLVANTAAGI 895
           LVAKPEQFDVMVTPNLYGNLVANTAAGI
Sbjct: 240 LVAKPEQFDVMVTPNLYGNLVANTAAGI 267