BLASTX nr result

ID: Coptis21_contig00013165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013165
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   129   1e-27
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]   114   3e-23
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   114   5e-23
emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]   113   8e-23
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   112   1e-22

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  129 bits (323), Expect = 1e-27
 Identities = 105/327 (32%), Positives = 154/327 (47%), Gaps = 27/327 (8%)
 Frame = -3

Query: 900  IVEK--DTEMVNWLDLPLGILPLIANKLINIKDYIRFGVVCRSWQSVYIENVRQYCPPSQ 727
            I++K   T M +W  +P   L LIA KL +++DY+RFG VC+SW S++ E+    CP S+
Sbjct: 910  IIQKINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIF-EDKECCCPSSK 968

Query: 726  LPFLMLTTKLDSEDEDENQTPSFYSLSERRVCNIRVTLPHNMVCRGSSHGWLVMTDQNYR 547
             P+LML  K +SE         FYS    +V  IR+       C GS +GWLV    +  
Sbjct: 969  SPWLMLAEKENSE------IRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDL- 1021

Query: 546  DVRLFNPFLVVNNEIKLPEFK--------LDTTC---------LYKVVLSANPASNANCV 418
            D+ L NP   V  +I LP  +        +D++          +YK VLS+ P S+ +C 
Sbjct: 1022 DMCLLNPLTRV--QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP-SSPDCA 1078

Query: 417  VMAVYGGCSRLAFFMPGDTTWTCDISLDGYHLSDYDCVFENVIWYKDLLYVVTWGGTLFA 238
            VM +Y    RLAF  PG  TWT   S  G          +++I++      V     ++ 
Sbjct: 1079 VMIIYSDYGRLAFTKPGHQTWTLLESESG--------PVDDIIYFNGSFLAVNLSWEVWI 1130

Query: 237  CDVYRPQPQLSRVAPSPKAR----FPSMRIYLVESSGDLLQVRRRLDSKGSTYF----TA 82
            CD+   Q +  R A +P  +          YLVES G++  V R L            T 
Sbjct: 1131 CDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTW 1190

Query: 81   EFEIFKLDSMAFKWDEVKSLCGRALFL 1
             F + KLD    +W+EV++L   + FL
Sbjct: 1191 TFSVLKLDMCNKRWEEVENLDHCSFFL 1217


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score =  114 bits (286), Expect = 3e-23
 Identities = 106/325 (32%), Positives = 154/325 (47%), Gaps = 31/325 (9%)
 Frame = -3

Query: 882  EMVNWLDLPLGILPLIANKLINIKDYIRFGVVCRSWQSVYIE-------NVRQYCPPSQL 724
            E   W  LP  +L  I N L +I D IRFG VC  W S+ ++       N R +  P  L
Sbjct: 129  EYSGWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPL 188

Query: 723  PFLMLTTKLDSEDEDENQTPSFYSLSERRVCNIRVTLPHNMVCRGSSHGWLVMTDQNYRD 544
            P+LM+ +K +S+D     + SFYS++ +++    + +P      GSSHGWL+ TD+    
Sbjct: 189  PWLMVLSKPNSKD-----SRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDET-NA 242

Query: 543  VRLFNPF------LVVNNEIKLPEFKL--DTTCLYKVVLSANPASNA-NCVVMAVYGGCS 391
            V L +PF      L     +K+P+  +      L+K VLSANP SN  + V+M +YG   
Sbjct: 243  VSLLHPFSRQVIRLPPLTRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDK 302

Query: 390  RLAFFMPGDTTWTC-------DISLDGYHLSDYDCV-FENVIWYKDLL--YVVTWGGTLF 241
             LAF   GD  W         D  LD  +  D     FE+VI+ +  L  Y +++   + 
Sbjct: 303  GLAFIKSGDQNWAYIDSMVMKDDVLDSPYFLDLSLFGFEDVIYQERELQFYALSYDSQVL 362

Query: 240  ACDVYRPQPQLSRVAPSPKARFPSMRIYLVES--SGDLLQVRRRLDSKGSTY-FTAEFEI 70
            A         +  V P      P+ ++YLVES    DL Q+      K S Y  ++ F++
Sbjct: 363  AIKTSGIGNMVKVVPPYNFGFVPAFKLYLVESPEGRDLWQI-----EKVSFYDKSSGFKV 417

Query: 69   FKLDSMAFK--WDEVKSLCGRALFL 1
            F +     K  W EV SL   ALFL
Sbjct: 418  FVMVDRETKPEWVEVNSLGDVALFL 442


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  114 bits (284), Expect = 5e-23
 Identities = 104/334 (31%), Positives = 152/334 (45%), Gaps = 42/334 (12%)
 Frame = -3

Query: 876 VNWLDLPLGILPLIANKLINIKDYIRFGVVCRSWQSVYIENVRQYCPPSQLPFLMLTTKL 697
           V W +LP  +L  I+  L    DY+RF  VCRSW+S  +  +  + PP QLP+LML+ + 
Sbjct: 3   VEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSS-VPKIPLHLPP-QLPWLMLSRR- 59

Query: 696 DSEDEDENQTPSFYSLSERRVCNIRVTLPHNMVCRGSSHGWLVMTDQNYRDVRLFNP--- 526
                      +F+ LS  +   +     H     GSSHGWLVM D+  + +RL NP   
Sbjct: 60  -----------AFFDLSLNKTHLLNPQPSHRTRICGSSHGWLVMLDETPQ-IRLLNPLTR 107

Query: 525 -------------------------FLVVNNEIKLPEFKLDTTC---LYKVVLSANPASN 430
                                    +L+ N    L  F L   C   L KVVLSA+P  N
Sbjct: 108 ATRPLPPLHAFPNVVAFDHANVGREYLIQNPYGGLYAFNLRQMCNSFLGKVVLSASPTLN 167

Query: 429 ANCVVMAVYGGCSRLAFFMPGDTTWTCDISLDGYHLSDYDCVFENVIWYKDLLYVVTWGG 250
            +   +A+ G  + LAF   G  +W   I L+G    + +C +E+V+ Y  L + V+ GG
Sbjct: 168 DDFAALAIVGQ-NNLAFCRNGYDSW---IFLNGEE-EEMNC-WEDVVNYNGLFFAVSKGG 221

Query: 249 TLFACDVYRP--QPQLSRVAPSPKARFPSMRIYLVESSGDLLQVRRRLDSKGS------- 97
           T+  CD       P++S +  +    F     Y V S+GD+L + R LD   S       
Sbjct: 222 TIAVCDAGEGCFPPRVSIIQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGEES 281

Query: 96  --TYFTAEFEIFKLDSMAFKWDEVKSLCGRALFL 1
              Y T  FE+FK++     W  V++L  R LF+
Sbjct: 282 DLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFV 315


>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score =  113 bits (282), Expect = 8e-23
 Identities = 95/295 (32%), Positives = 139/295 (47%), Gaps = 22/295 (7%)
 Frame = -3

Query: 873 NWLDLPLGILPLIANKLINIKDYIRFGVVCRSWQSVYIENVRQYCPPSQ--LPFLMLTTK 700
           +W  LP  ++ LI ++L +  D IRFG VCR W  V +E  +Q   P +   P L+L   
Sbjct: 5   DWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLPPN 64

Query: 699 LDSEDEDENQTPSFYSLSERRVCNIRVTLPHNMVCRGSSHGWLVMTDQNY-RDVRLFNPF 523
            D E          Y   +++   I++    +  C  S +GWL+  +  +  ++   NP 
Sbjct: 65  KDDE------AHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPI 118

Query: 522 LVVNNEIKLPEF--------KLDTT----CLYKVVLSANPA-SNANCVVMAVYGGCSRLA 382
             V  +I LP           LD T     L KVVLS+ P+ SNANCV+MA++    +LA
Sbjct: 119 SGV--QIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYKKLA 176

Query: 381 FFMPGDTTWTCDISLDGYHLSDYDCVFENVIWYKDLLYVVTWGGTLFACDVYRPQPQLSR 202
           F  PGD  W          L   D  ++++++YKD  Y +     +  CD+    P++  
Sbjct: 177 FCKPGDKRWIT--------LKSEDIQYKDLLYYKDNFYAI-GRSKVVQCDI-GDDPRVIP 226

Query: 201 VAPSPKARFPSMRIYLVESSGDLLQVRRRLDSKGS------TYFTAEFEIFKLDS 55
            A  PK  +   R YLVESSG LL V R +D K         Y T  F++F LDS
Sbjct: 227 FALLPKMGYFQYR-YLVESSGCLLYVLRYMDLKDXEDPLKLRYETTGFKVFDLDS 280


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  112 bits (280), Expect = 1e-22
 Identities = 96/335 (28%), Positives = 152/335 (45%), Gaps = 42/335 (12%)
 Frame = -3

Query: 879 MVNWLDLPLGILPLIANKLINIKDYIRFGVVCRSWQSVYIENVRQYCPPSQLPFLMLTTK 700
           M +W  L   +L  IA K     DY+RF  VC +W++   +       P+QLP+LML   
Sbjct: 1   MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHL--PTQLPWLMLP-- 56

Query: 699 LDSEDEDENQTPSFYSLSERRVCNIRVT-LPHNMVCRGSSHGWLVMTDQNYRDVRLFNPF 523
              + +  +    F+SLS  +   +++    H    RGSSHGWL++ D+   ++ L NP 
Sbjct: 57  ---QSQPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEA-PEIFLLNP- 111

Query: 522 LVVNNEIKLP------------------EFKLDTTC---------------LYKVVLSAN 442
            +  +++ LP                  E+ L T+                + K +LS++
Sbjct: 112 -LTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSS 170

Query: 441 PASNANCVVMAVYGGCSRLAFFMPGDTTWTCDISLDGYHLSDYDCVFENVIWYKDLLYVV 262
           PA+ ++ + + +      LA     D +WT         L D     E+VI+++ L Y V
Sbjct: 171 PANGSDFIAVVILNQTGDLALCRKSDDSWT--------FLEDAQSYSEDVIFHRGLFYAV 222

Query: 261 TWGGTLFACDVYRPQPQLSRVAPSPKARFPSMRIYLVESSGDLLQVRRRLD--------S 106
              G++  CDV    P++S +   P+ +F     YLVES  +LL V R LD         
Sbjct: 223 NKYGSIAVCDVSGSSPRVS-IIEMPQ-QFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQ 280

Query: 105 KGSTYFTAEFEIFKLDSMAFKWDEVKSLCGRALFL 1
               Y T  F++ +LDS A +W+ V SL  RALFL
Sbjct: 281 TSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFL 315


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