BLASTX nr result
ID: Coptis21_contig00013136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00013136
(1933 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] 552 e-154
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat... 550 e-154
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,... 520 e-145
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat... 507 e-141
ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|2... 494 e-137
>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 552 bits (1422), Expect = e-154
Identities = 274/463 (59%), Positives = 345/463 (74%)
Frame = +1
Query: 283 KVQSILQLHMNNSVKEVEKALDRCGVVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 462
+VQ++L+ + ++SV E+E AL +C + L DD VL++LK HRSDW+ A +F W S+ G +
Sbjct: 89 EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXE 148
Query: 463 NMYSPGSSVYNEMMDILGRMKRFMELGEVFDEMSRREEGLVNERTFGILLNRYAGAHKVE 642
+ YSPG V+NE++DILGRM+RF E+ ++FDEMS+R+ GL NERTFG+LLNRYA AHK E
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRK-GLXNERTFGVLLNRYAAAHKTE 207
Query: 643 EAIEVFYKRREFGLELDLFAFQTLLLSLCRYKHVETAESLFLEKKNEFPLDIKTLNIILN 822
EA+++FYKR+ G ELDL AFQTLL+SLCRYKHVE AE LF KKNEFP DIK++N+ILN
Sbjct: 208 EAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILN 267
Query: 823 GWCVRGNLREAKRFWKDILDSGCKPDMFTYGIFINSLTKAGKVSTATKLFRSMSENGCAP 1002
GWCV G+LREAKRFW DI+ S CKPD FTYGIFINSLTKAGK+STA KLF++M E GC P
Sbjct: 268 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNP 327
Query: 1003 DVVICNCVIDSLCFKKRIPQALEIFKEMKERGCPPNVATYNSLIKHLCKIVRXXXXXXXX 1182
DV ICNC+ID+LCFKKRIP+ALE+ +EM ER C P+VATYNSLIKHLCKI R
Sbjct: 328 DVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELL 387
Query: 1183 XXXXXXXGSCTPNEITFICLLKAAKKPEEVHGVLERMKRNDCRVAGDTYNMILKLFLDWN 1362
C PN T+ LLK+ KKPEEV G+LERM+RN CR+ D YN+ILKL++DW
Sbjct: 388 DDMEQK--GCLPNARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWG 445
Query: 1363 DVQGVQSVWTEMEKNGVGPDQRSYTIMIHRLHKKGRVEEALKCFKEMMSKGMIQEPRTDL 1542
++S EME+NG+GPDQR+YTIMIH L+ KGR+++AL FK+M GM+ EPRT L
Sbjct: 446 YELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTL 505
Query: 1543 LVTNMKTKLNERKHQHGGCEIGEVRGSAKQRKKNKANSSGPSS 1671
LV M KL ER+ + G + +NKA+S PS+
Sbjct: 506 LVNAMNIKLKEREAEPEG-----------KGARNKADSIRPST 537
>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 550 bits (1418), Expect = e-154
Identities = 273/460 (59%), Positives = 345/460 (75%), Gaps = 4/460 (0%)
Frame = +1
Query: 283 KVQSILQLHMNNSVKEVEKALDRCGVVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 462
+VQ++L+ + ++SV E+E AL +C + L DD VL++LK HRSDW+ A +F W S+ G +
Sbjct: 89 EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148
Query: 463 NMYSPGSSVYNEMMDILGRMKRFMELGEVFDEMSRREEGLVNERTFGILLNRYAGAHKVE 642
+ YSPG V+NE++DILGRM+RF E+ ++FDEMS+R+ GLVNERTFG+LLNRYA AHK E
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRK-GLVNERTFGVLLNRYAAAHKTE 207
Query: 643 EAIEVFYKRREFGLELDLFAFQTLLLSLCRYKHVETAESLFLEKKNEFPLDIKTLNIILN 822
EA+++F KR+ G ELDL AFQTLL+SLCRYKHVE AE LF KKNEFP DIK++N+ILN
Sbjct: 208 EAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILN 267
Query: 823 GWCVRGNLREAKRFWKDILDSGCKPDMFTYGIFINSLTKAGKVSTATKLFRSMSENGCAP 1002
GWCV G+LREAKRFW DI+ S CKPD FTYGIFINSLTKAGK+STA KLF++M E GC P
Sbjct: 268 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNP 327
Query: 1003 DVVICNCVIDSLCFKKRIPQALEIFKEMKERGCPPNVATYNSLIKHLCKIVRXXXXXXXX 1182
DV ICNC+ID+LCFKKRIP+ALE+ +EM ER C P+VATYNSLIKHLCKI R
Sbjct: 328 DVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELL 387
Query: 1183 XXXXXXXGSCTPNEITFICLLKAAKKPEEVHGVLERMKRNDCRVAGDTYNMILKLFLDWN 1362
C PN T+ LLK+ KKPEEV G+LERM+RN CR+ D YN+ILKL++DW
Sbjct: 388 DDMEQK--GCLPNARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWG 445
Query: 1363 DVQGVQSVWTEMEKNGVGPDQRSYTIMIHRLHKKGRVEEALKCFKEMMSKGMIQEPRTDL 1542
++S EME+NG+GPDQR+YTIMIH L+ KGR+++AL FK+M GM+ EPRT L
Sbjct: 446 YELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTL 505
Query: 1543 LVTNMKTKLNERKHQHGG----CEIGEVRGSAKQRKKNKA 1650
LV M KL ER+ + G + +R S ++ KK +A
Sbjct: 506 LVNAMNIKLKEREAEPEGKGARNKADSIRPSTRRGKKKRA 545
>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 520 bits (1339), Expect = e-145
Identities = 250/437 (57%), Positives = 326/437 (74%)
Frame = +1
Query: 283 KVQSILQLHMNNSVKEVEKALDRCGVVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 462
KVQ++L+ + ++ +++E AL +C + +D +L++LK HRSDWK AL +F WVSKGG+
Sbjct: 51 KVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKV 110
Query: 463 NMYSPGSSVYNEMMDILGRMKRFMELGEVFDEMSRREEGLVNERTFGILLNRYAGAHKVE 642
M GS YNE++DILG+M+RF EL +V D MS+RE GLVNE T+ +L+NRYA AHKVE
Sbjct: 111 LM---GSGAYNEILDILGKMRRFDELSQVLDIMSKRE-GLVNEETYRVLVNRYAAAHKVE 166
Query: 643 EAIEVFYKRREFGLELDLFAFQTLLLSLCRYKHVETAESLFLEKKNEFPLDIKTLNIILN 822
EAIE+F RR+ GLE+DL +FQ LL+ LCRYKHV+ AESL K +F +DIKT+NI+LN
Sbjct: 167 EAIEIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLN 226
Query: 823 GWCVRGNLREAKRFWKDILDSGCKPDMFTYGIFINSLTKAGKVSTATKLFRSMSENGCAP 1002
GWCV GN+ EAKRFWKDI+ S CKPD+FTYG FI +LTK GK+ TA K++R+M E C P
Sbjct: 227 GWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKP 286
Query: 1003 DVVICNCVIDSLCFKKRIPQALEIFKEMKERGCPPNVATYNSLIKHLCKIVRXXXXXXXX 1182
DVVICNC+ID+LCFK R+P+ALE+F+EM ++GC PN ATYNSLIKH +I R
Sbjct: 287 DVVICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELL 346
Query: 1183 XXXXXXXGSCTPNEITFICLLKAAKKPEEVHGVLERMKRNDCRVAGDTYNMILKLFLDWN 1362
GSC P+ ITF LLKA KKPEE+ VLERM+RN C ++ DTYN+IL+L+ DW+
Sbjct: 347 DEMLDKKGSCMPDHITFNYLLKALKKPEELPLVLERMERNGCMISTDTYNLILRLYADWD 406
Query: 1363 DVQGVQSVWTEMEKNGVGPDQRSYTIMIHRLHKKGRVEEALKCFKEMMSKGMIQEPRTDL 1542
+ V W EMEK G+GPD+RSYTIMIH L++KGR+ +AL F EM SKGM+ EPRT++
Sbjct: 407 CEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYFGEMTSKGMVSEPRTEM 466
Query: 1543 LVTNMKTKLNERKHQHG 1593
LV++M KL + + G
Sbjct: 467 LVSSMNMKLKDNDAEQG 483
>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 507 bits (1306), Expect = e-141
Identities = 245/428 (57%), Positives = 324/428 (75%), Gaps = 3/428 (0%)
Frame = +1
Query: 286 VQSILQLHMNNSVKEVEKALDRCGVVLNDDFVLELLKWHRSDWKSALRYFYWVSKGG-RK 462
VQ++L + V+++E+AL C +VL DDFVL++L+ HRSDW A +F WV K G +
Sbjct: 95 VQNVLYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNE 154
Query: 463 NMYSPGSSVYNEMMDILGRMKRFMELGEVFDEMSRREEGLVNERTFGILLNRYAGAHKVE 642
++PGS +YNE++ ILG+ +RF E+ +V EMS+R+E LVNE T+ +LLNRYA AHKVE
Sbjct: 155 EKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKE-LVNEETYSVLLNRYAAAHKVE 213
Query: 643 EAIEVFYKRREFGLELDLFAFQTLLLSLCRYKHVETAESLFLEKKNEFPLDIKTLNIILN 822
EAI +FY+R+EFGLE++L AFQ+LL+ LCRYKHVE AE+LF KK+EF DIKT NIILN
Sbjct: 214 EAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILN 273
Query: 823 GWCVRGNLREAKRFWKDILDSGCKPDMFTYGIFINSLTKAGKVSTATKLFRSMSENGCAP 1002
GWCV GN+ EAKRFW++I++S C+PD++TYG INSLTK GK+ TA KLFR+M E G
Sbjct: 274 GWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTT 333
Query: 1003 DVVICNCVIDSLCFKKRIPQALEIFKEMKERGCPPNVATYNSLIKHLCKIVRXXXXXXXX 1182
DVVICNC+ID+LCFKKRIP+ALEIFKEM ERGC NVATYN+LIKHLCKI R
Sbjct: 334 DVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELL 393
Query: 1183 XXXXXXXGSCTPNEITFICLLKAAKKPEEVHGVLERMKRNDCRVAGDTYNMILKLFLDWN 1362
GSC PN +TFI LL + + PEEV + +RM+R+ C++ D YN+IL+L++DW+
Sbjct: 394 NEMEERKGSCWPNSVTFIYLLGSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWD 453
Query: 1363 DVQGVQSVWTEMEKNGVGPDQRSYTIMIHRLHKKGRVEEALKCFKEMMSKGMIQEPRTDL 1542
+ V+S W EM++ G+GPD+RSYTIMIH L++KGR ++ L+ F EM KG++ EP+T+
Sbjct: 454 IQERVKSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEK 513
Query: 1543 LV--TNMK 1560
LV TN+K
Sbjct: 514 LVNATNVK 521
>ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|222860547|gb|EEE98094.1|
predicted protein [Populus trichocarpa]
Length = 433
Score = 494 bits (1271), Expect = e-137
Identities = 254/434 (58%), Positives = 311/434 (71%), Gaps = 3/434 (0%)
Frame = +1
Query: 364 LNDDFVLELLKWHRSDWKSALRYFYWVSKGGRKNMYSPGSSVYNEMMDILGRMKRFMELG 543
+ D VL++LK HRSDWK A +F WVSK G ++ S VYNE++DILGRM+RF EL
Sbjct: 1 MTQDLVLKVLKRHRSDWKPAYIFFNWVSKEGTISL---SSCVYNEILDILGRMRRFEELT 57
Query: 544 EVFDEMSRREEGLVNERTFGILLNRYAGAHKVEEAIEVFYKRREFGLELDLFAFQTLLLS 723
V DEMS+RE G V+E T+ +L+NRYAGAH VEEAI F KRRE GLELDL +FQ LL+
Sbjct: 58 LVLDEMSKRE-GFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMY 116
Query: 724 LCRYKHVETAESLFLEKKNEFPLDIKTLNIILNGWCVRGNLREAKRFWKDILDSGCKPDM 903
LCRYKHV+ AE+L K +EF +DIKT+NI+LNGWCV GN+REAKRFWKDI+ S CKPD+
Sbjct: 117 LCRYKHVDVAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDV 176
Query: 904 FTYGIFINSLTKAGKVSTATKLFRSMSENGCAPDVVICNCVIDSLCFKKRIPQALEIFKE 1083
FTYG FI +LT GK+ TA KL+ +M + C PDVVICNCVID+LCFKKR+P+AL +F+
Sbjct: 177 FTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEG 236
Query: 1084 MKERGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXXGSCTPNEITFICLLKAAKKP 1263
MKERGC PNVATYNSLIKH+CKI R GSC P+EITF LLK+ KKP
Sbjct: 237 MKERGCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSLKKP 296
Query: 1264 EEVHGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQGVQSVWTEMEKNGVGPDQRSYTIM 1443
EEV GVLERMK N C++ DT N++LKL DW+ + V+ W EMEKNG+G D+RSYTIM
Sbjct: 297 EEVAGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIM 356
Query: 1444 IHRLHKKGRVEEALKCFKEMMSKGMIQEPRTDLLVTNMKT---KLNERKHQHGGCEIGEV 1614
IH L+ KGRVE+AL+ F EM +KGM+ EPRT +L +M T K E +
Sbjct: 357 IHWLYDKGRVEDALRYFGEMENKGMVPEPRTKILCNSMNTRKQKEAEEGEKSAKNNDQSP 416
Query: 1615 RGSAKQRKKNKANS 1656
R S ++ K K NS
Sbjct: 417 RSSHERNTKKKVNS 430